Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21810 Brassica carinata HOM05D009521 ORTHO05D013247 1.1e-99 366.7 192 100.0
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 2.3e-41 172.9 191 51.8
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 4.5e-37 158.7 199 52.3
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 2.2e-36 156.4 183 51.4
BraA03t10622Z Brassica rapa HOM05D009521 ORTHO05D013247 1.4e-33 147.1 188 48.4
BcaC08g43434 Brassica carinata HOM05D009521 ORTHO05D013247 5.2e-33 145.2 157 53.5
BolC8t47401H Brassica oleracea HOM05D009521 ORTHO05D013247 8.2e-31 137.9 191 47.6
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-30 136.7 177 49.2
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-27 126.7 159 49.7
BcaB03g14951 Brassica carinata HOM05D009521 ORTHO05D013247 2.2e-23 113.2 117 54.7
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 4.8e-23 112.1 164 46.3
C08p02090 Brassica napus HOM05D009521 ORTHO05D013247 3.5e-21 105.9 167 45.5
BcaB04g17620 Brassica carinata HOM05D009521 ORTHO05D013247 5.9e-21 105.1 165 46.7
BcaC03g14454 Brassica carinata HOM05D009521 ORTHO05D092480 2.9e-20 102.8 115 53.0
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 3.6e-18 95.9 171 40.4
BcaB06g26355 Brassica carinata HOM05D009521 ORTHO05D013247 8.0e-18 94.7 117 53.0
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 1.0e-17 94.4 169 46.2
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 1.2e-16 90.9 174 40.2
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 1.2e-16 90.9 170 40.6
C06p36790 Brassica napus HOM05D000385 ORTHO05D027499 2.0e-16 90.1 184 40.2
BcaB01g03972 Brassica carinata HOM05D001608 ORTHO05D000411 1.3e-15 87.4 185 41.1
BolC7t46676H Brassica oleracea HOM05D009521 ORTHO05D013247 1.3e-15 87.4 96 54.2
BcaC08g45878 Brassica carinata HOM05D000385 ORTHO05D027499 1.7e-15 87.0 196 37.8
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 2.8e-15 86.3 160 41.2
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 6.3e-15 85.1 110 47.3
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-14 84.0 170 36.5
A06p43610 Brassica napus HOM05D009521 ORTHO05D039276 2.4e-14 83.2 196 38.3
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 3.1e-14 82.8 94 52.1
BolC6t38788H Brassica oleracea HOM05D000385 ORTHO05D027499 1.6e-13 80.5 191 36.1
BcaNung02100 Brassica carinata HOM05D009521 ORTHO05D013247 2.0e-13 80.1 109 45.0
BcaC02g12560 Brassica carinata HOM05D011474 ORTHO05D021753 2.7e-13 79.7 164 36.0
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-13 79.0 142 43.0
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-13 79.0 156 41.7
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-13 79.0 168 38.7
C02p64250 Brassica napus HOM05D009521 ORTHO05D039737 5.9e-13 78.6 177 39.5
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-13 78.2 137 43.1
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-12 75.5 197 34.5
C01p12130 Brassica napus HOM05D064822 ORTHO05D042739 1.5e-11 73.9 172 36.0
BcaC07g36967 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-11 73.6 147 40.8
BcaC02g09343 Brassica carinata HOM05D000003 ORTHO05D021670 3.3e-11 72.8 137 38.0
BraA10t43181Z Brassica rapa HOM05D009521 ORTHO05D016806 4.3e-11 72.4 178 36.0
BcaC04g23248 Brassica carinata HOM05D058839 ORTHO05D039755 5.6e-11 72.0 80 53.8
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 1.2e-10 70.9 157 38.9
BcaC08g45025 Brassica carinata HOM05D009521 ORTHO05D000411 1.4e-09 67.4 132 37.9
BraA10t43491Z Brassica rapa HOM05D011474 ORTHO05D021753 1.4e-09 67.4 169 34.3
A10p14000 Brassica napus HOM05D011474 ORTHO05D021753 1.8e-09 67.0 169 34.3
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-09 65.9 95 45.3
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 4.0e-09 65.9 180 32.2
BcaC07g38371 Brassica carinata HOM05D009521 ORTHO05D027438 6.8e-09 65.1 64 54.7
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 6.8e-09 65.1 140 39.3
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 1.5e-08 63.9 131 40.5
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 1.5e-08 63.9 189 32.8
BolC6t36503H Brassica oleracea HOM05D000106 ORTHO05D000160 1.5e-08 63.9 157 37.6
BcaC09g47652 Brassica carinata HOM05D000003 ORTHO05D000006 7.5e-08 61.6 185 35.1
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 60.1 189 27.5
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 59.7 195 34.9
C03p41040 Brassica napus HOM05D011474 ORTHO05D021753 2.9e-07 59.7 101 39.6
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-07 59.3 140 36.4
BcaB05g23257 Brassica carinata HOM05D011474 ORTHO05D016098 8.3e-07 58.2 175 32.6
C09p33330 Brassica napus HOM05D000022 ORTHO05D016806 8.3e-07 58.2 60 53.3
BolC9t56170H Brassica oleracea HOM05D000022 ORTHO05D016806 8.3e-07 58.2 60 53.3
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 8.3e-07 58.2 170 31.8
BcaC03g17293 Brassica carinata HOM05D009521 ORTHO05D039276 1.9e-06 57.0 93 45.2
BcaC04g18995 Brassica carinata HOM05D040003 ORTHO05D031801 1.9e-06 57.0 95 42.1
BcaB05g22665 Brassica carinata HOM05D011474 ORTHO05D021753 3.2e-06 56.2 125 36.0


User provided reference genes

Program Settings