Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21787 Brassica carinata HOM05D008152 ORTHO05D010231 9.2e-26 119.4 58 100.0
C02p01660 Brassica napus HOM05D008152 ORTHO05D010231 7.5e-20 99.8 58 89.7
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 1.9e-18 95.1 56 89.3
Sp6g38660 Schrenkiella parvula HOM05D008152 ORTHO05D010231 4.6e-17 90.5 58 82.8
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 1.6e-14 82.0 56 78.6
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 2.1e-14 81.6 56 83.9
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 2.9e-11 71.2 56 73.2
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 8.3e-11 69.7 56 71.4
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 1.1e-10 69.3 56 71.4
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 1.9e-10 68.6 56 71.4
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 9.2e-10 66.2 47 76.6
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 1.2e-09 65.9 54 74.1
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 2.7e-09 64.7 54 70.4
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 2.3e-08 61.6 56 67.9
AT5G04080 Arabidopsis thaliana HOM05D008152 ORTHO05D010231 3.0e-08 61.2 41 78.0
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 8.6e-08 59.7 57 66.7
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 1.5e-07 58.9 57 63.2
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 1.5e-07 58.9 57 63.2
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 1.5e-07 58.9 57 63.2
BolC3t12740H Brassica oleracea HOM05D008152 ORTHO05D010231 1.5e-07 58.9 57 63.2
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 1.5e-07 58.9 57 63.2
BcaB01g05882 Brassica carinata HOM05D008152 ORTHO05D010231 4.3e-07 57.4 57 61.4


User provided reference genes

Program Settings