Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21783 Brassica carinata HOM05D000589 ORTHO05D014060 2.4e-28 128.3 71 100.0
BcaNung03039 Brassica carinata HOM05D000589 ORTHO05D014060 5.8e-22 107.1 71 85.9
BcaC01g03083 Brassica carinata HOM05D000589 ORTHO05D014060 3.7e-21 104.4 71 84.5
BcaC02g10036 Brassica carinata HOM05D000589 ORTHO05D014060 1.9e-20 102.1 71 81.7
BcaC03g15056 Brassica carinata HOM05D000589 ORTHO05D014060 3.2e-20 101.3 71 81.7
BcaC09g50787 Brassica carinata HOM05D000589 ORTHO05D014060 6.0e-19 97.1 71 80.3
BcaC06g34169 Brassica carinata HOM05D000589 ORTHO05D014060 7.8e-19 96.7 71 78.9
BolC9t58870H Brassica oleracea HOM05D000589 ORTHO05D027472 2.3e-18 95.1 71 77.5
BcaC03g15613 Brassica carinata HOM05D000589 ORTHO05D014060 3.3e-17 91.3 71 77.5
BolC2t09327H Brassica oleracea HOM05D000589 ORTHO05D014060 1.6e-16 89.0 71 76.1
BcaC05g29657 Brassica carinata HOM05D000589 ORTHO05D014060 1.4e-15 85.9 71 70.4
BcaC02g09735 Brassica carinata HOM05D000589 ORTHO05D014060 2.4e-12 75.1 78 62.8
BolC6t36890H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-09 66.2 65 58.5
BcaC05g27498 Brassica carinata HOM05D000589 ORTHO05D014060 4.3e-09 64.3 58 58.6
BolC5t32197H Brassica oleracea HOM05D000589 ORTHO05D000401 4.3e-09 64.3 58 58.6
CARHR151420 Cardamine hirsuta HOM05D000589 ORTHO05D014060 2.8e-08 61.6 47 68.1
C02p22880 Brassica napus HOM05D000589 ORTHO05D000401 6.2e-08 60.5 67 50.7
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 6.2e-08 60.5 59 55.9
BolC4t27556H Brassica oleracea HOM05D000589 ORTHO05D000401 8.1e-08 60.1 45 62.2
BcaC03g17917 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-07 58.9 71 50.7
BolC1t03974H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-07 58.2 71 49.3
BolC1t04683H Brassica oleracea HOM05D009120 ORTHO05D024093 3.1e-07 58.2 47 59.6
BolC9t55147H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-07 58.2 44 61.4
BolC9t58423H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-07 58.2 47 59.6
BcaC01g04973 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-07 57.8 68 50.0
BcaC01g06309 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-07 57.8 69 49.3
BcaC04g19453 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-07 57.8 47 59.6
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 4.0e-07 57.8 68 50.0
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 4.0e-07 57.8 69 49.3
BcaB07g32864 Brassica carinata HOM05D000589 ORTHO05D000401 8.9e-07 56.6 66 45.5
BcaC03g14627 Brassica carinata HOM05D000589 ORTHO05D000401 8.9e-07 56.6 47 57.4
BcaC07g39621 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-06 56.2 60 55.0
AT5G52547 Arabidopsis thaliana HOM05D000589 ORTHO05D014060 1.5e-06 55.8 63 47.6
BcaC05g25995 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-06 55.8 57 50.9
BcaC03g16442 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-06 55.5 56 51.8
BcaC03g17918 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-06 55.5 58 58.6
CARHR057040 Cardamine hirsuta HOM05D000589 ORTHO05D000401 2.0e-06 55.5 62 53.2
BcaC01g03681 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-06 55.1 66 51.5
BcaC03g17200 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-06 54.7 47 57.4
BcaC09g48667 Brassica carinata HOM05D009120 ORTHO05D024093 3.4e-06 54.7 46 54.3
C01p47140 Brassica napus HOM05D009120 ORTHO05D024093 3.4e-06 54.7 46 54.3
CARHR256470 Cardamine hirsuta HOM05D000589 ORTHO05D000401 3.4e-06 54.7 46 58.7
BcaB08g35107 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-06 53.9 68 48.5
BcaC02g11154 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-06 53.9 46 54.3
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-06 53.9 43 62.8
BolC5t34603H Brassica oleracea HOM05D000589 ORTHO05D000401 5.8e-06 53.9 66 48.5
Carub.0005s0847 Capsella rubella HOM05D000589 ORTHO05D000401 5.8e-06 53.9 68 50.0
BcaC02g09851 Brassica carinata HOM05D000589 ORTHO05D000401 7.6e-06 53.5 68 50.0
BcaC07g38856 Brassica carinata HOM05D000589 ORTHO05D000401 7.6e-06 53.5 47 57.4
BolC6t38830H Brassica oleracea HOM05D000589 ORTHO05D014060 7.6e-06 53.5 40 77.5
BcaC06g33355 Brassica carinata HOM05D000589 ORTHO05D000401 9.9e-06 53.1 50 60.0


User provided reference genes

Program Settings