Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 4.5e-291 1003.8 489 100.0
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 6.9e-175 617.8 413 77.7
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 3.4e-174 615.5 465 71.0
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 7.7e-174 614.4 401 78.6
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 6.1e-163 578.2 401 74.6
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 8.8e-162 574.3 506 62.3
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-158 563.9 525 60.2
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-147 526.6 421 66.0
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-145 519.2 397 67.3
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-143 513.5 458 62.4
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 6.5e-141 505.0 437 62.2
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-140 503.4 399 66.7
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 3.6e-139 499.2 436 62.2
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-137 492.7 452 60.0
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-136 490.7 408 64.7
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-135 487.6 421 62.5
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 2.4e-135 486.5 490 57.6
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 3.1e-135 486.1 506 55.7
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-130 470.7 490 54.7
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-127 459.5 388 61.9
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-125 454.5 304 76.3
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 2.3e-125 453.4 388 61.9
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 7.8e-118 428.3 385 59.5
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-113 413.7 304 70.7
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 2.1e-110 403.7 338 64.2
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-106 389.8 379 57.3
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-105 386.7 382 56.8
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-79 301.6 219 69.4
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-75 286.6 402 46.0
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 1.1e-74 285.0 401 45.4
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 1.1e-74 285.0 401 45.4
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 3.8e-72 276.6 405 44.7
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-71 272.7 402 43.8
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 7.1e-71 272.3 401 43.4
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 6.0e-70 269.2 399 44.1
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 6.0e-70 269.2 413 43.6
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 5.1e-69 266.2 387 44.2
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 2.5e-68 263.8 376 44.4
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 4.3e-68 263.1 390 43.8
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 7.4e-68 262.3 394 42.6
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-67 260.4 283 53.7
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 6.3e-67 259.2 387 42.9
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.1e-66 258.5 392 42.9
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 1.8e-66 257.7 386 42.2
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 6.9e-66 255.8 389 42.7
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 4.5e-65 253.1 377 42.7
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.3e-61 241.5 399 40.9
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-59 233.8 235 57.0
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 7.7e-57 225.7 384 39.1
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 5.0e-56 223.0 403 39.7
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-51 208.0 249 48.6
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 3.4e-49 200.3 152 69.1
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 6.1e-46 189.5 376 35.1
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 5.0e-40 169.9 137 64.2
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 4.2e-39 166.8 277 42.6
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 6.1e-38 162.9 153 58.8
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 2.6e-36 157.5 274 36.9
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 6.3e-35 152.9 200 43.0
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 3.1e-34 150.6 155 53.5
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-31 139.8 196 48.0
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.1e-30 137.9 195 43.6
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 2.7e-30 137.5 185 43.2
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-29 135.2 382 30.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 4.8e-27 126.7 431 28.5
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.4e-26 125.2 357 32.8
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.4e-26 124.4 386 30.8
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 3.1e-26 124.0 433 28.6
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 1.2e-25 122.1 356 31.2
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 2.0e-25 121.3 107 61.7
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-25 120.6 188 40.4
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.3e-24 118.6 203 39.4
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 3.8e-24 117.1 265 37.4
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 3.8e-24 117.1 115 55.7
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 3.8e-24 117.1 415 28.2
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-23 113.2 261 36.4
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 9.5e-23 112.5 183 38.3
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 9.5e-23 112.5 179 39.1
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-22 112.1 183 37.7
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 1.0e-21 109.0 190 40.5
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.8e-21 108.2 376 29.8
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 8.3e-19 99.4 76 63.2
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 1.8e-18 98.2 180 37.2
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 2.4e-18 97.8 160 36.9
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 4.1e-18 97.1 175 35.4
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 4.1e-18 97.1 60 75.0
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 5.9e-17 93.2 82 58.5
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 1.5e-15 88.6 179 35.2
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 2.8e-14 84.3 175 33.1
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 6.1e-14 83.2 142 40.1
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 8.0e-14 82.8 174 32.8
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.0e-13 82.4 367 24.3
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 5.2e-13 80.1 77 55.8
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 8.9e-13 79.3 161 32.9
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 9.8e-12 75.9 89 42.7
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-11 75.1 137 38.7
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.1e-10 72.4 160 36.9
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.2e-09 68.9 160 36.2
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.0e-08 65.9 71 45.1
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 1.3e-08 65.5 164 32.3
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 5.0e-08 63.5 173 26.6
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 6.6e-08 63.2 100 42.0
BolC7t41820H Brassica oleracea HOM05D023794 ORTHO05D028264 6.6e-08 63.2 150 32.0
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 8.6e-08 62.8 73 50.7
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 3.3e-07 60.8 89 40.4
C04p58590 Brassica napus HOM05D000075 ORTHO05D014840 7.3e-07 59.7 134 33.6
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 1.2e-06 58.9 188 31.4
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 2.1e-06 58.2 208 28.8
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 2.1e-06 58.2 123 32.5
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 8.0e-06 56.2 210 27.6
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 8.0e-06 56.2 28 89.3


User provided reference genes

Program Settings