Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 7.7e-32 139.8 68 100.0
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-22 109.4 63 81.0
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 2.0e-19 98.6 61 77.0
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.7e-18 95.5 71 73.2
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.7e-18 95.5 66 68.2
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-18 95.1 70 72.9
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 2.2e-18 95.1 70 72.9
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 4.8e-18 94.0 66 66.7
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 9.1e-17 89.7 69 68.1
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 6.5e-15 83.6 87 48.3
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-14 82.8 60 68.3
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-14 82.8 60 68.3
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-14 82.8 60 68.3
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 3.2e-14 81.3 65 64.6
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 4.7e-13 77.4 64 60.9
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 7.5e-11 70.1 63 57.1
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-10 68.9 73 50.7
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 1.7e-10 68.9 61 57.4
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-10 68.6 61 57.4
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 2.2e-10 68.6 61 57.4
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 3.7e-10 67.8 61 57.4
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-09 64.7 72 52.8
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 3.1e-09 64.7 72 52.8
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 3.1e-09 64.7 63 52.4
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 7.0e-09 63.5 72 51.4
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-08 62.0 72 50.0
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 3.8e-07 57.8 32 71.9
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 1.9e-06 55.5 52 55.8
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-06 53.9 32 68.8
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 9.5e-06 53.1 52 53.8


User provided reference genes

Program Settings