Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21734 Brassica carinata HOM05D000209 ORTHO05D032056 7.6e-88 327.0 153 100.0
A03p36560 Brassica napus HOM05D000209 ORTHO05D000129 4.5e-56 221.5 147 74.1
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-56 221.1 149 71.8
BcaC01g04180 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-55 219.5 148 73.6
BolC3t16691H Brassica oleracea HOM05D000209 ORTHO05D000129 1.7e-55 219.5 148 73.6
BraA03t12823Z Brassica rapa HOM05D000209 ORTHO05D000129 5.0e-55 218.0 144 74.3
C03p44180 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-54 216.1 150 70.7
BcaC01g04182 Brassica carinata HOM05D000209 ORTHO05D000129 4.2e-54 214.9 126 81.0
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-54 214.2 147 76.2
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-54 214.2 147 76.2
BcaB04g18597 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-53 213.4 148 73.0
BcaB04g18598 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-53 213.4 148 73.0
A03p36540 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-51 206.5 150 72.7
A05p00430 Brassica napus HOM05D000209 ORTHO05D000129 6.3e-50 201.1 150 69.3
BraA05t19041Z Brassica rapa HOM05D000209 ORTHO05D000129 6.3e-50 201.1 150 69.3
BcaC01g04181 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-49 199.1 149 69.8
C03p44170 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-49 199.1 149 69.8
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-48 196.4 147 70.1
BraA03t12821Z Brassica rapa HOM05D000209 ORTHO05D000129 2.7e-48 195.7 149 69.8
C03p44150 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-47 193.0 149 67.8
BolC3t16690H Brassica oleracea HOM05D000209 ORTHO05D000129 1.7e-47 193.0 149 67.8
BcaB05g22381 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-36 156.8 149 53.0
C03p44200 Brassica napus HOM05D000209 ORTHO05D032056 4.0e-36 155.2 103 75.7
BolC3t16692H Brassica oleracea HOM05D000209 ORTHO05D032056 4.0e-36 155.2 103 75.7
BraA01t04254Z Brassica rapa HOM05D000209 ORTHO05D000129 2.6e-35 152.5 150 56.7
BolC1t05397H Brassica oleracea HOM05D000209 ORTHO05D000129 3.4e-35 152.1 149 55.7
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-34 149.8 150 56.0
BcaB03g12436 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-34 149.1 145 50.3
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-33 147.1 150 54.0
BolC1t05401H Brassica oleracea HOM05D000209 ORTHO05D000129 1.8e-33 146.4 150 49.3
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 7.0e-33 144.4 146 50.0
BcaC09g48095 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-33 144.1 150 48.7
BcaC09g48096 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-32 143.7 150 48.7
BcaC09g48097 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-32 143.7 150 48.7
BcaC09g48098 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-32 143.7 150 48.7
BolC1t05399H Brassica oleracea HOM05D000209 ORTHO05D000129 5.0e-31 138.3 150 48.0
BraA01t04256Z Brassica rapa HOM05D000209 ORTHO05D000129 4.3e-30 135.2 150 48.0
A01p41870 Brassica napus HOM05D000209 ORTHO05D000129 5.6e-30 134.8 150 48.0
BolC1t05398H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-30 134.4 151 47.7
BcaB03g12435 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-29 133.3 151 48.3
C05p57730 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-29 132.5 148 45.3
BolC5t34430H Brassica oleracea HOM05D000209 ORTHO05D000129 2.8e-29 132.5 148 45.3
A01p41840 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-29 132.1 151 47.0
BraA01t04255Z Brassica rapa HOM05D000209 ORTHO05D000129 3.6e-29 132.1 151 47.0
BcaC05g29467 Brassica carinata HOM05D000209 ORTHO05D000129 6.2e-29 131.3 146 45.2
BcaC09g48091 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-28 129.4 151 45.7
BcaC09g48092 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-28 129.4 144 47.9
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-28 128.6 153 45.8
BcaB03g16795 Brassica carinata HOM05D000209 ORTHO05D000129 5.2e-28 128.3 153 45.8
BcaB04g21204 Brassica carinata HOM05D000209 ORTHO05D000129 4.4e-27 125.2 119 59.7
BcaB04g21210 Brassica carinata HOM05D000209 ORTHO05D000129 4.9e-26 121.7 147 43.5
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.2e-25 117.5 152 39.5
AT3G08750 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.8e-24 114.4 145 40.7
Carub.0006s3257 Capsella rubella HOM05D000209 ORTHO05D000129 7.8e-24 114.4 158 40.5
BcaB04g21207 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-23 111.3 152 44.7
CARHR099050 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.3e-22 109.0 126 49.2
A03p36580 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-22 108.6 72 76.4
BolC3t17532H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-22 107.8 149 42.3
BcaC01g03433 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-21 107.1 149 42.3
C03p52640 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-21 107.1 149 42.3
BraA03t13432Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-21 107.1 149 42.3
Carub.0006s3251 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-21 107.1 156 38.5
Carub.0006s3242 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-21 106.3 153 39.2
BcaB03g15317 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-21 105.9 148 43.2
BcaB03g16794 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-21 105.9 148 43.2
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.2e-21 104.8 152 38.2
A03p42860 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-20 102.1 151 41.1
BcaB04g19209 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-20 101.3 148 36.5
Carub.0006s3259 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-20 101.3 159 37.1
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.0e-19 99.8 147 38.8
BcaC05g29465 Brassica carinata HOM05D000903 ORTHO05D000731 4.4e-19 98.6 148 38.5
Carub.0003s0788 Capsella rubella HOM05D000209 ORTHO05D000129 3.7e-18 95.5 147 36.1
BcaC09g48094 Brassica carinata HOM05D000209 ORTHO05D000129 6.4e-18 94.7 92 52.2
AT3G10430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.3e-18 94.4 150 42.0
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.1e-17 94.0 135 36.3
Carub.0003s0964 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-17 93.2 151 39.7
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-17 92.0 147 36.1
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 4.1e-17 92.0 148 39.2
Aa31LG8G9160 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.2e-16 90.5 153 34.6
BraA03t12824Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-16 90.5 61 67.2
Carub.0003s0962 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-16 90.5 150 35.3
Carub.0003s0963 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-16 89.0 150 38.7
Thhalv10021952m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.6e-15 84.3 147 36.7
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.3e-14 81.3 148 32.4
C03p00590 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-13 79.7 153 36.6
BolC3t12624H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-13 79.7 153 36.6
CARHR097380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.8e-13 79.3 150 33.3
BcaB06g28621 Brassica carinata HOM05D002665 ORTHO05D002991 1.1e-12 77.4 35 94.3
CARHR044120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.1e-12 77.4 158 30.4
BcaB01g06091 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-12 76.6 151 35.8
BcaB01g06092 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-12 76.6 151 35.8
Aa31LG8G9200 Aethionema arabicum HOM05D000209 ORTHO05D000129 8.9e-12 74.3 158 32.9
BcaB03g15318 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-12 74.3 103 43.7
AL5G33670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-11 73.9 133 33.8
AT3G21410 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-11 73.9 147 31.3
CARHR238210 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.6e-11 72.8 153 32.0
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 4.4e-11 72.0 147 32.7
Aa31LG8G9180 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.1e-09 67.4 133 32.3
BraA03t13377Z Brassica rapa HOM05D000209 ORTHO05D000129 7.1e-09 64.7 148 31.8
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 9.2e-09 64.3 148 29.7
BcaC03g14676 Brassica carinata HOM05D000209 ORTHO05D000129 3.5e-08 62.4 149 30.2
BolC2t08255H Brassica oleracea HOM05D000209 ORTHO05D000129 3.5e-08 62.4 149 30.2
BcaC09g47983 Brassica carinata HOM05D000209 ORTHO05D000129 6.0e-08 61.6 72 50.0
C02p21150 Brassica napus HOM05D000209 ORTHO05D000129 6.0e-08 61.6 148 30.4
AT1G77650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.8e-08 61.2 171 29.2
A03p42240 Brassica napus HOM05D000209 ORTHO05D000129 7.8e-08 61.2 148 31.1
C07p01420 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-07 59.7 148 33.8
BcaB01g05954 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-07 59.3 149 26.8
BraA03t09598Z Brassica rapa HOM05D000209 ORTHO05D000129 3.9e-07 58.9 148 27.0
C05p57680 Brassica napus HOM05D000209 ORTHO05D000129 8.6e-07 57.8 55 49.1
BolC5t34425H Brassica oleracea HOM05D000209 ORTHO05D000129 8.6e-07 57.8 55 49.1
A02p13030 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-06 56.6 151 29.1
BraA02t06359Z Brassica rapa HOM05D000209 ORTHO05D000129 1.9e-06 56.6 151 29.1
BcaC01g03274 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-06 55.8 150 28.0
BolC1t04711H Brassica oleracea HOM05D000209 ORTHO05D000129 9.6e-06 54.3 107 29.9
BolC1t04715H Brassica oleracea HOM05D000209 ORTHO05D000129 9.6e-06 54.3 107 29.9


User provided reference genes

Program Settings