Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 6.4e-96 354.0 168 100.0
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 6.4e-96 354.0 168 100.0
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 4.2e-87 324.7 166 92.8
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 3.9e-85 318.2 167 90.4
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 4.8e-83 311.2 162 91.4
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 3.1e-82 308.5 162 88.9
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 3.1e-82 308.5 162 88.9
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 3.1e-82 308.5 162 88.9
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 9.9e-81 303.5 156 91.0
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 4.8e-75 284.6 146 89.7
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 4.8e-75 284.6 146 89.7
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 1.3e-67 260.0 164 75.6
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.8e-66 256.1 163 74.2
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 3.1e-66 255.4 163 73.6
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 3.1e-66 255.4 163 73.6
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 5.5e-55 218.0 184 63.0
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 7.4e-52 207.6 123 79.7
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.8e-48 195.3 156 63.5
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 3.6e-46 188.7 154 62.3
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 7.9e-46 187.6 159 64.8
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.7e-43 179.9 139 66.2
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.1e-42 177.2 157 61.1
C02p02170 Brassica napus HOM05D008885 ORTHO05D006152 7.7e-41 171.0 169 57.4
BolC2t06186H Brassica oleracea HOM05D008885 ORTHO05D006152 2.9e-40 169.1 166 57.2
BcaC03g13145 Brassica carinata HOM05D008885 ORTHO05D006152 6.1e-38 161.4 93 80.6
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.1e-34 150.6 157 49.0
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.2e-32 142.9 157 46.5
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.5e-31 138.3 138 49.3
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.4e-29 133.7 156 45.5
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.7e-27 125.6 163 42.9
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 7.7e-25 117.9 135 45.9
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.7e-24 116.7 126 46.8
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 5.5e-23 111.7 147 40.8
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 5.7e-20 101.7 141 36.9
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-18 97.1 141 36.9
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-18 96.3 154 38.3
Carub.0006s0399 Capsella rubella HOM05D008885 ORTHO05D006152 1.6e-17 93.6 61 72.1
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-17 92.4 169 36.1
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.6e-16 88.2 140 37.1
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.5e-15 87.0 137 34.3
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-15 87.0 126 35.7
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-15 87.0 169 34.9
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.9e-15 86.7 157 36.3
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.3e-15 85.9 155 34.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.6e-15 85.1 156 35.3
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-14 84.0 139 34.5
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.6e-14 83.6 162 34.6
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 4.7e-14 82.0 148 35.1
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 4.7e-14 82.0 141 34.8
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 6.1e-14 81.6 140 35.7
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 6.1e-14 81.6 140 35.7
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 8.0e-14 81.3 166 33.1
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 8.0e-14 81.3 127 37.0
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-13 80.9 141 36.2
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.4e-13 80.5 126 38.9
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-13 80.5 166 33.1
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.0e-13 79.3 135 39.3
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 4.0e-13 79.0 166 32.5
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 4.0e-13 79.0 166 32.5
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.8e-13 78.2 133 32.3
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 8.9e-13 77.8 146 34.2
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 8.9e-13 77.8 152 32.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-12 76.6 166 32.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.0e-12 76.6 158 31.6
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 3.4e-12 75.9 114 37.7
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.5e-12 74.7 127 35.4
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-11 73.6 95 40.0
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-11 73.6 95 40.0
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-11 72.8 113 36.3
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.3e-11 71.2 139 33.8
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-10 70.9 142 34.5
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.4e-10 70.5 158 30.4
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-10 69.7 108 34.3
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 2.4e-10 69.7 103 34.0
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 9.2e-10 67.8 110 35.5
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.6e-09 67.0 140 32.1
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-09 66.6 99 34.3
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-09 65.9 104 37.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-08 63.5 141 32.6
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-08 63.5 110 34.5
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.3e-08 63.2 97 38.1
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.0e-08 62.8 112 33.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-08 62.4 120 33.3
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-08 62.4 120 33.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 5.0e-08 62.0 121 33.9
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.0e-08 62.0 136 32.4
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 6.6e-08 61.6 136 32.4
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 6.6e-08 61.6 136 32.4
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 8.6e-08 61.2 139 31.7
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 8.6e-08 61.2 139 31.7
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.1e-07 60.8 100 38.0
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 1.9e-07 60.1 124 30.6
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-07 60.1 110 30.9
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-07 60.1 110 30.9
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-07 59.3 122 31.1
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 5.6e-07 58.5 149 28.2
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 7.3e-07 58.2 139 29.5
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 9.5e-07 57.8 116 30.2
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-06 56.6 112 32.1
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-06 56.6 116 30.2
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-06 55.8 104 30.8
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.7e-06 55.5 112 31.2


User provided reference genes

Program Settings