Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 7.7e-70 266.9 126 100.0
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 5.0e-53 211.1 122 78.7
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 8.6e-53 210.3 125 77.6
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 3.3e-52 208.4 125 76.0
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 3.3e-52 208.4 125 76.0
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 7.3e-52 207.2 123 79.7
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 7.3e-52 207.2 123 79.7
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 9.5e-52 206.8 123 79.7
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.2e-51 206.5 124 78.2
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.2e-51 206.5 124 78.2
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.2e-51 206.5 124 78.2
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 1.0e-50 203.4 124 76.6
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 2.3e-50 202.2 124 79.0
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 3.1e-50 201.8 123 77.2
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 3.1e-50 201.8 123 77.2
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 1.5e-49 199.5 123 77.2
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 4.7e-43 177.9 159 57.2
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 8.1e-35 150.6 124 58.9
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.5e-33 146.4 117 60.7
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 2.0e-33 146.0 126 56.3
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.1e-30 136.0 125 56.8
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.3e-29 133.3 112 58.9
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.1e-26 123.6 126 49.2
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.2e-26 121.3 125 48.0
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.2e-24 115.9 126 46.0
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.9e-24 115.5 127 48.8
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.3e-21 106.7 125 42.4
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 3.0e-21 105.5 125 42.4
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.1e-20 103.6 119 42.9
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 3.1e-18 95.5 135 37.8
C02p02170 Brassica napus HOM05D008885 ORTHO05D006152 6.9e-18 94.4 123 46.3
BcaC03g13145 Brassica carinata HOM05D008885 ORTHO05D006152 9.0e-18 94.0 50 82.0
BolC2t06186H Brassica oleracea HOM05D008885 ORTHO05D006152 4.4e-17 91.7 124 45.2
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.2e-16 89.4 112 41.1
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 8.4e-16 87.4 125 34.4
Carub.0006s0399 Capsella rubella HOM05D008885 ORTHO05D006152 8.4e-16 87.4 61 68.9
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.1e-15 87.0 122 35.2
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-14 83.2 123 34.1
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.7e-14 82.4 121 33.9
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 3.5e-14 82.0 112 33.0
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.9e-14 80.9 111 36.0
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.3e-13 80.1 110 37.3
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-13 79.7 111 35.1
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 5.1e-13 78.2 115 36.5
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 6.6e-13 77.8 123 32.5
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.7e-13 77.4 114 36.0
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-12 77.0 110 32.7
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-12 76.6 95 37.9
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-12 76.6 127 33.9
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-12 76.6 127 33.9
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-12 76.3 127 33.9
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-12 75.1 127 33.9
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-12 75.1 113 31.9
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 4.3e-12 75.1 113 31.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.4e-12 74.3 111 31.5
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 9.6e-12 73.9 109 31.2
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 9.6e-12 73.9 114 36.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.3e-11 73.6 115 33.0
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-11 72.8 127 32.3
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-11 72.0 127 31.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.6e-11 72.0 112 31.2
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 6.2e-11 71.2 121 33.1
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.2e-11 71.2 115 32.2
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-11 70.9 114 32.5
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-10 70.1 131 30.5
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.1e-10 68.9 111 31.5
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.9e-10 67.8 111 36.0
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-09 67.0 111 33.3
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.2e-09 67.0 113 31.9
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 5.8e-09 64.7 111 34.2
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 7.6e-09 64.3 96 30.2
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 7.6e-09 64.3 100 32.0
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-08 63.5 110 30.0
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-08 62.0 111 27.0
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 3.8e-08 62.0 111 27.0
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 4.9e-08 61.6 113 30.1
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 8.4e-08 60.8 113 30.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 8.4e-08 60.8 113 30.1
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.1e-07 60.5 116 29.3
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-07 60.5 113 30.1
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 3.2e-07 58.9 107 31.8
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-07 58.9 98 31.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 3.2e-07 58.9 98 31.6
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.2e-07 58.5 113 28.3
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 9.3e-07 57.4 114 30.7
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 9.3e-07 57.4 114 30.7
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 9.3e-07 57.4 113 26.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-06 57.0 113 29.2
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-06 55.5 77 35.1
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.5e-06 55.5 83 36.1


User provided reference genes

Program Settings