Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21672 Brassica carinata HOM05D000757 ORTHO05D000622 3.4e-33 144.4 75 100.0
AL6G16460 Arabidopsis lyrata HOM05D000757 ORTHO05D000622 8.2e-19 96.7 64 76.6
CARHR207120 Cardamine hirsuta HOM05D000757 ORTHO05D000622 1.1e-18 96.3 69 72.5
AT5G06370 Arabidopsis thaliana HOM05D000757 ORTHO05D000622 3.1e-18 94.7 66 71.2
Carub.0006s0526 Capsella rubella HOM05D000757 ORTHO05D000622 3.1e-18 94.7 66 72.7
BcaB01g05990 Brassica carinata HOM05D000757 ORTHO05D000622 1.2e-17 92.8 66 72.7
C03p03100 Brassica napus HOM05D000757 ORTHO05D000622 1.2e-17 92.8 66 72.7
A03p02700 Brassica napus HOM05D000757 ORTHO05D000622 1.6e-17 92.4 66 71.2
BolC3t12858H Brassica oleracea HOM05D000757 ORTHO05D000622 1.6e-17 92.4 66 72.7
BraA03t09632Z Brassica rapa HOM05D000757 ORTHO05D000622 1.6e-17 92.4 66 71.2
Thhalv10014443m.g Eutrema salsugineum HOM05D000757 ORTHO05D000622 1.6e-17 92.4 67 71.6
Sp6g36480 Schrenkiella parvula HOM05D000757 ORTHO05D000622 2.6e-17 91.7 64 75.0
Potri.006G203300 Populus trichocarpa HOM05D000757 ORTHO05D000622 9.4e-15 83.2 66 65.2
THA.LOC104816622 Tarenaya hassleriana HOM05D000757 ORTHO05D000622 1.2e-14 82.8 63 68.3
GSVIVG01011152001 Vitis vinifera HOM05D000757 ORTHO05D000622 3.6e-14 81.3 62 67.7
MBI17_g28775_MAGBIO Magnolia biondii HOM05D000757 ORTHO05D000622 8.0e-14 80.1 61 65.6
CAN.G574.16 Capsicum annuum HOM05D000757 ORTHO05D000622 1.0e-13 79.7 66 60.6
Oeu044260.1 Olea europaea HOM05D000757 ORTHO05D000622 1.0e-13 79.7 64 62.5
Sabra06G0156500 Salix brachista HOM05D000757 ORTHO05D000622 1.0e-13 79.7 64 65.6
Ca_11699_v3 Cicer arietinum L. HOM05D000757 ORTHO05D000622 1.4e-13 79.3 64 60.9
COL.COLO4_29573 Corchorus olitorius HOM05D000757 ORTHO05D000622 1.4e-13 79.3 66 59.1
Dinv12338 Davidia involucrata HOM05D000757 ORTHO05D000622 1.4e-13 79.3 64 62.5
MSTRG.19309 Avicennia marina HOM05D000757 ORTHO05D000622 1.8e-13 79.0 64 64.1
Lj1C1052T0 Lonicera japonica HOM05D000757 ORTHO05D000622 1.8e-13 79.0 62 64.5
Nitab4.5_0002686g0050 Nicotiana tabacum HOM05D000757 ORTHO05D000622 1.8e-13 79.0 66 60.6
Nitab4.5_0002844g0050 Nicotiana tabacum HOM05D000757 ORTHO05D000622 1.8e-13 79.0 66 60.6
Sed0002721 Sechium edule HOM05D000757 ORTHO05D000622 1.8e-13 79.0 64 62.5
Solyc01g007110.3 Solanum lycopersicum HOM05D000757 ORTHO05D000622 1.8e-13 79.0 64 62.5
Sopen01g003090 Solanum pennellii HOM05D000757 ORTHO05D000622 1.8e-13 79.0 64 62.5
DCAR_013441 Daucus carota HOM05D000757 ORTHO05D000622 2.3e-13 78.6 64 62.5
Hma1.2p1_0079F.1_g041830 Hydrangea macrophylla HOM05D000757 ORTHO05D000622 2.3e-13 78.6 64 59.4
Thecc.05G104400 Theobroma cacao HOM05D000757 ORTHO05D000622 2.3e-13 78.6 66 60.6
Ciclev10011935m.g Citrus clementina HOM05D000757 ORTHO05D000622 4.0e-13 77.8 66 59.1
Duzib093G0534 Durio zibethinus HOM05D000757 ORTHO05D000622 4.0e-13 77.8 64 62.5
MD14G1039000 Malus domestica HOM05D000757 ORTHO05D000622 5.2e-13 77.4 70 57.1
PSO339G0037 Papaver somniferum HOM05D000757 ORTHO05D000622 5.2e-13 77.4 61 62.3
PSO384G3249 Papaver somniferum HOM05D000757 ORTHO05D000622 5.2e-13 77.4 61 62.3
Psat6g114720 Pisum sativum HOM05D000757 ORTHO05D000622 5.2e-13 77.4 64 59.4
TWI74G0715 Tripterygium wilfordii HOM05D000757 ORTHO05D000622 5.2e-13 77.4 64 60.9
ClCG10G018340 Citrullus lanatus HOM05D000757 ORTHO05D000622 6.8e-13 77.0 64 59.4
CsaV3_3G037960 Cucumis sativus L. HOM05D000757 ORTHO05D000622 6.8e-13 77.0 64 59.4
HanXRQChr09g0239981 Helianthus annuus HOM05D000757 ORTHO05D000622 6.8e-13 77.0 64 60.9
QL07p036742 Quercus lobata HOM05D000757 ORTHO05D000622 6.8e-13 77.0 66 57.6
PGSC0003DMG400021354 Solanum tuberosum HOM05D000757 ORTHO05D000622 6.8e-13 77.0 64 62.5
Gohir.D09G130600 Gossypium hirsutum HOM05D000757 ORTHO05D000622 1.2e-12 76.3 62 62.9
Gorai.006G149300 Gossypium raimondii HOM05D000757 ORTHO05D000622 1.2e-12 76.3 62 62.9
Aqoxy1G00658 Aquilegia oxysepala HOM05D000757 ORTHO05D000622 1.5e-12 75.9 61 63.9
Cfa020029 Carpinus fangiana HOM05D000757 ORTHO05D000622 1.5e-12 75.9 64 59.4
Peaxi162Scf00586g00514 Petunia axillaris HOM05D000757 ORTHO05D000622 1.5e-12 75.9 66 57.6
MELO3C009540.2 Cucumis melo HOM05D000757 ORTHO05D000622 2.0e-12 75.5 64 57.8
Medtr1g057650 Medicago truncatula HOM05D000757 ORTHO05D000622 2.0e-12 75.5 62 61.3
CSS0017936 Camellia sinensis var. sinensis HOM05D000757 ORTHO05D000622 2.6e-12 75.1 64 57.8
CiPaw.10G017500 Carya illinoinensis HOM05D000757 ORTHO05D000622 2.6e-12 75.1 64 59.4
Lsat_1_v5_gn_2_54320 Lactuca sativa HOM05D000757 ORTHO05D000622 2.6e-12 75.1 61 60.7
Manes.08G033600 Manihot esculenta HOM05D000757 ORTHO05D000622 2.6e-12 75.1 61 62.3
Atru.chr8.1361 Acer truncatum HOM05D000757 ORTHO05D000622 3.4e-12 74.7 61 62.3
Migut.J00702 Erythranthe guttata HOM05D000757 ORTHO05D000622 3.4e-12 74.7 62 59.7
Gohir.A09G134100 Gossypium hirsutum HOM05D000757 ORTHO05D000622 3.4e-12 74.7 62 61.3
Lalb_Chr06g0164331 Lupinus albus HOM05D000757 ORTHO05D000622 4.4e-12 74.3 64 57.8
Oeu050411.2 Olea europaea HOM05D000757 ORTHO05D000622 4.4e-12 74.3 64 54.7
Aa31sc52G220 Aethionema arabicum HOM05D000757 ORTHO05D000622 5.7e-12 73.9 63 60.3
Cc06_g06560 Coffea canephora HOM05D000757 ORTHO05D000622 5.7e-12 73.9 64 60.9
DCAR_016916 Daucus carota HOM05D000757 ORTHO05D000622 5.7e-12 73.9 64 57.8
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 5.7e-12 73.9 64 60.9
Nn2g14306 Nelumbo nucifera HOM05D000757 ORTHO05D000622 5.7e-12 73.9 61 59.0
Eucgr.A02591 Eucalyptus grandis HOM05D000757 ORTHO05D000622 7.5e-12 73.6 68 61.8
QL07p036715 Quercus lobata HOM05D000757 ORTHO05D000622 7.5e-12 73.6 66 56.1
TAR623G0640 Trochodendron aralioides HOM05D000757 ORTHO05D000622 7.5e-12 73.6 66 59.1
TAR623G0993 Trochodendron aralioides HOM05D000757 ORTHO05D000622 7.5e-12 73.6 66 59.1
TAR623G1250 Trochodendron aralioides HOM05D000757 ORTHO05D000622 7.5e-12 73.6 66 59.1
MELO3C009539.2 Cucumis melo HOM05D000757 ORTHO05D000622 9.7e-12 73.2 61 60.7
CsaV3_3G037980 Cucumis sativus L. HOM05D000757 ORTHO05D000622 1.3e-11 72.8 64 56.2
FvH4_6g20310 Fragaria vesca HOM05D000757 ORTHO05D000622 1.3e-11 72.8 66 54.5
FAN14G0763 Fragaria x ananassa HOM05D000757 ORTHO05D000622 1.3e-11 72.8 66 54.5
RcHm_v2.0_Chr3g0475931 Rosa chinensis HOM05D000757 ORTHO05D000622 1.3e-11 72.8 66 54.5
vmacro05106 Vaccinium macrocarpon HOM05D000757 ORTHO05D000622 1.3e-11 72.8 64 57.8
VMungo0720G3129 Vigna mungo HOM05D000757 ORTHO05D000622 1.3e-11 72.8 61 59.0
Cpa.g.sc104.31 Carica papaya HOM05D000757 ORTHO05D000622 1.7e-11 72.4 55 67.3
TPR.G2817 Trifolium pratense HOM05D000757 ORTHO05D000622 1.7e-11 72.4 64 54.7
FAN09G4624 Fragaria x ananassa HOM05D000757 ORTHO05D000622 2.2e-11 72.0 61 59.0
Nn6g34688 Nelumbo nucifera HOM05D000757 ORTHO05D000622 2.8e-11 71.6 61 60.7
EL10Ac5g12971 Beta vulgaris HOM05D000757 ORTHO05D000622 3.7e-11 71.2 64 54.7
FAN05G3154 Fragaria x ananassa HOM05D000757 ORTHO05D000622 4.8e-11 70.9 61 59.0
CANSAT64G2199 Cannabis sativa HOM05D000757 ORTHO05D000622 6.3e-11 70.5 66 54.5
Haze_20184 Corylus avellana HOM05D000757 ORTHO05D000622 6.3e-11 70.5 64 56.2
FAN02G0415 Fragaria x ananassa HOM05D000757 ORTHO05D000622 6.3e-11 70.5 61 59.0
PGR142G1589 Punica granatum HOM05D000757 ORTHO05D000622 1.1e-10 69.7 71 56.3
TAR633G1120 Trochodendron aralioides HOM05D000757 ORTHO05D000622 1.1e-10 69.7 61 59.0
Phvul.007G268000 Phaseolus vulgaris HOM05D000757 ORTHO05D000622 1.4e-10 69.3 61 54.1
Prupe.7G094600 Prunus persica HOM05D000757 ORTHO05D000622 1.8e-10 68.9 79 48.1
PGR004G1908 Punica granatum HOM05D000757 ORTHO05D000622 1.8e-10 68.9 64 59.4
Lj5g0010470 Lotus japonicus HOM05D000757 ORTHO05D000622 2.4e-10 68.6 61 57.4
FAN05G4472 Fragaria x ananassa HOM05D000757 ORTHO05D000622 3.1e-10 68.2 66 53.0
SGA_v2.0_scaffold31G12852 Striga asiatica HOM05D000757 ORTHO05D000622 3.1e-10 68.2 62 56.5
AUR62030736 Chenopodium quinoa HOM05D000757 ORTHO05D000622 4.1e-10 67.8 64 53.1
Glyma.10G081500 Glycine max HOM05D000757 ORTHO05D000622 4.1e-10 67.8 64 51.6
Actinidia37746 Actinidia chinensis HOM05D000757 ORTHO05D000622 5.3e-10 67.4 52 69.2
Os05g0440100 Oryza sativa ssp. japonica HOM05D000757 ORTHO05D000622 5.3e-10 67.4 61 55.7
Sc07g0006410 Simmondsia chinensis HOM05D000757 ORTHO05D000622 5.3e-10 67.4 60 58.3
Eucgr.K02621 Eucalyptus grandis HOM05D000757 ORTHO05D000622 9.1e-10 66.6 64 57.8
Hund14954 Selenicereus undatus HOM05D000757 ORTHO05D000622 1.2e-09 66.2 64 51.6
Glyma.02G196800 Glycine max HOM05D000757 ORTHO05D000622 2.0e-09 65.5 64 50.0
SGA_v2.0_scaffold13G06635 Striga asiatica HOM05D000757 ORTHO05D000622 2.0e-09 65.5 55 63.6
HPP92_001098 Vanilla planifolia HOM05D000757 ORTHO05D000622 3.5e-09 64.7 61 54.1
Ah.02g115440 Amaranthus hybridus HOM05D000757 ORTHO05D000622 1.7e-08 62.4 69 50.7
AUR62036375 Chenopodium quinoa HOM05D000757 ORTHO05D000622 1.7e-08 62.4 64 50.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 3.8e-08 61.2 58 55.2
ATR0772G174 Amborella trichopoda HOM05D000757 ORTHO05D000622 2.5e-07 58.5 54 53.7
PGR142G0240 Punica granatum HOM05D000757 ORTHO05D000622 9.4e-07 56.6 71 45.1


User provided reference genes

Program Settings