Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21647 Brassica carinata HOM05D000171 ORTHO05D000101 7.2e-71 270.4 129 100.0
BcaB05g21645 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-53 213.4 108 95.4
BcaNung06828 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-43 179.1 89 98.9
BcaC09g51689 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-39 166.8 109 78.0
BcaNung05190 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-39 166.8 117 70.1
BcaC09g50641 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-39 164.9 108 74.1
BcaNung05078 Brassica carinata HOM05D000171 ORTHO05D000101 6.1e-38 161.0 109 74.3
BcaNung00927 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-35 152.5 111 69.4
BcaB05g21572 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-29 131.7 91 70.3
AL8G27960 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.4e-26 121.3 116 56.0
BcaC06g35480 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-24 114.0 118 55.1
C07p15590 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-24 114.0 116 56.0
BolC7t42046H Brassica oleracea HOM05D000171 ORTHO05D000101 8.6e-24 114.0 118 55.1
BcaB04g21056 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-23 113.2 111 58.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 9.5e-23 110.5 118 55.1
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.2e-22 110.2 118 54.2
CARHR029830 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.0e-22 107.5 114 50.9
Thhalv10007869m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-21 106.7 123 53.7
BcaC09g50888 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-21 106.3 108 53.7
CARHR029970 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.8e-21 106.3 116 52.6
AL1G44920 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-21 104.4 124 46.8
Thhalv10002533m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.9e-21 104.0 118 51.7
Carub.0001s2069 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-20 103.2 119 49.6
AT1G30790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-19 100.1 125 46.4
Carub.0001s3352 Capsella rubella HOM05D000171 ORTHO05D000101 7.0e-18 94.4 128 45.3
Carub.0001s2863 Capsella rubella HOM05D000171 ORTHO05D000101 2.7e-17 92.4 124 46.8
AL1G44860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-15 86.7 119 40.3
AL1G49450 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-15 86.7 127 40.2
BraA07t28504Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-15 85.5 124 42.7
CARHR144020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.3e-15 85.1 126 42.9
Carub.0001s3191 Capsella rubella HOM05D000171 ORTHO05D000101 5.6e-15 84.7 127 36.2
AL1G48130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-14 83.6 140 34.3
Thhalv10009556m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-14 83.6 113 47.8
BraA07t28501Z Brassica rapa HOM05D000171 ORTHO05D000101 6.2e-14 81.3 124 40.3
C07p10820 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-13 79.0 125 40.0
AT1G32660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.8e-13 77.8 118 41.5
CARHR029840 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-13 77.8 92 50.0
CARHR253630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-12 77.0 115 42.6
A07p09960 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-12 75.9 108 44.4
AL1G44470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-12 75.5 118 41.5
BcaC06g35792 Brassica carinata HOM05D000171 ORTHO05D000101 3.4e-12 75.5 125 39.2
BolC7t41548H Brassica oleracea HOM05D000171 ORTHO05D000101 3.4e-12 75.5 125 39.2
BcaB04g21067 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-12 75.1 78 60.3
AL1G44890 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-11 72.4 79 58.2
AL1G44400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.4e-11 71.2 79 57.0
Carub.0001s2866 Capsella rubella HOM05D000171 ORTHO05D000101 8.3e-11 70.9 97 45.4
Carub.0001s3186 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-10 70.5 118 36.4
BolC7t42021H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-10 70.1 108 42.6
Carub.0008s0623 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-10 69.3 111 34.2
Carub.0004s0470 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-10 68.6 112 36.6
BcaB05g25188 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-10 68.2 129 36.4
Carub.0002s0113 Capsella rubella HOM05D000171 ORTHO05D000101 7.0e-10 67.8 130 35.4
BcaNung00757 Brassica carinata HOM05D000171 ORTHO05D019702 1.2e-09 67.0 46 60.9
Thhalv10023943m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-09 67.0 118 39.8
CARHR030250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.0e-09 66.2 115 39.1
Carub.0004s0469 Capsella rubella HOM05D000171 ORTHO05D000101 4.6e-09 65.1 117 35.9
Carub.0001s3806 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-08 63.5 109 38.5
Thhalv10009419m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-08 63.5 118 37.3
Carub.0001s3323 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-07 60.1 114 34.2
AL6G33850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.9e-07 59.7 112 33.9
AL6G33830 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-07 58.5 114 33.3
AL6G33870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-07 58.5 112 33.0
A10p18200 Brassica napus HOM05D000171 ORTHO05D000101 4.3e-07 58.5 110 34.5
BraA07t27864Z Brassica rapa HOM05D000171 ORTHO05D000101 4.3e-07 58.5 118 28.8
BraA10t43895Z Brassica rapa HOM05D000171 ORTHO05D000101 4.3e-07 58.5 110 34.5
AL6G26510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-07 57.8 111 33.3
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-07 57.4 117 30.8
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-07 57.4 116 30.2
A07p00660 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-07 57.4 118 28.0
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 9.5e-07 57.4 116 30.2
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-06 57.0 116 30.2
BraA08t35273Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-06 57.0 116 30.2
BcaB03g16785 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-06 56.6 118 28.8
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-06 56.6 116 31.9
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-06 55.1 116 29.3
A03p10910 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-06 54.7 112 30.4
BraA03t10401Z Brassica rapa HOM05D000171 ORTHO05D000101 6.2e-06 54.7 112 30.4
CARHR190780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.2e-06 54.7 116 31.0


User provided reference genes

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