Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21608 Brassica carinata HOM05D000124 ORTHO05D000056 3.9e-60 234.6 115 100.0
BcaB05g21606 Brassica carinata HOM05D000124 ORTHO05D000056 3.9e-36 154.8 79 97.5
BcaC06g32422 Brassica carinata HOM05D000124 ORTHO05D000056 2.1e-26 122.5 101 67.3
BcaC03g13195 Brassica carinata HOM05D000124 ORTHO05D000056 3.7e-26 121.7 97 69.1
C02p03210 Brassica napus HOM05D000124 ORTHO05D000056 3.7e-26 121.7 97 69.1
BolC2t06284H Brassica oleracea HOM05D000124 ORTHO05D000056 3.7e-26 121.7 97 69.1
Thhalv10014666m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 4.1e-25 118.2 115 59.1
BcaC06g32492 Brassica carinata HOM05D000124 ORTHO05D000056 9.0e-25 117.1 120 56.7
C09p69690 Brassica napus HOM05D000124 ORTHO05D000056 9.0e-25 117.1 115 59.1
BolC9t59712H Brassica oleracea HOM05D000124 ORTHO05D000056 9.0e-25 117.1 115 59.1
A10p29320 Brassica napus HOM05D000124 ORTHO05D000056 3.4e-24 115.2 120 56.7
Sp6g35290 Schrenkiella parvula HOM05D000124 ORTHO05D000056 6.5e-23 110.9 120 58.3
BraA10t44976Z Brassica rapa HOM05D000124 ORTHO05D000056 8.4e-23 110.5 120 55.0
BcaC06g32491 Brassica carinata HOM05D000124 ORTHO05D000056 3.2e-22 108.6 62 83.9
BraA02t04925Z Brassica rapa HOM05D000124 ORTHO05D000056 4.6e-21 104.8 79 74.7
Carub.0006s0656 Capsella rubella HOM05D000124 ORTHO05D000056 5.1e-20 101.3 115 52.2
AT5G07580 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 1.3e-18 96.7 118 50.0
AL6G17890 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 3.7e-18 95.1 117 49.6
Aa31LG3G18840 Aethionema arabicum HOM05D000124 ORTHO05D000056 4.5e-16 88.2 121 47.1
CARHR205570 Cardamine hirsuta HOM05D000124 ORTHO05D000056 8.5e-15 84.0 62 71.0
THA.LOC104801608 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 4.2e-14 81.6 98 52.0
AT5G61590 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 3.3e-11 72.0 113 41.6
CARHR275380 Cardamine hirsuta HOM05D000124 ORTHO05D000056 3.3e-11 72.0 67 56.7
Sp2g24800 Schrenkiella parvula HOM05D000124 ORTHO05D000056 3.3e-11 72.0 67 58.2
AL1041U10010 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 4.3e-11 71.6 68 60.3
Thhalv10005285m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 4.3e-11 71.6 110 41.8
AL8G38320 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 7.4e-11 70.9 110 44.5
Carub.0008s2228 Capsella rubella HOM05D000124 ORTHO05D000056 4.8e-10 68.2 112 40.2
BolC7t45052H Brassica oleracea HOM05D000124 ORTHO05D000056 1.1e-09 67.0 115 40.0
THA.LOC104818307 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 1.8e-09 66.2 103 41.7
A09p07350 Brassica napus HOM05D000124 ORTHO05D000056 3.1e-09 65.5 113 39.8
BraA09t36390Z Brassica rapa HOM05D000124 ORTHO05D000056 3.1e-09 65.5 113 39.8
BcaNung01425 Brassica carinata HOM05D000124 ORTHO05D000056 5.3e-09 64.7 67 55.2
A03p47190 Brassica napus HOM05D000124 ORTHO05D000056 5.3e-09 64.7 115 39.1
BraA03t13847Z Brassica rapa HOM05D000124 ORTHO05D000056 5.3e-09 64.7 117 38.5
C07p45290 Brassica napus HOM05D000124 ORTHO05D000056 2.0e-08 62.8 115 38.3


User provided reference genes

Program Settings