Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.3e-54 216.1 108 100.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.7e-52 208.0 108 96.3
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.8e-52 207.6 108 96.3
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 8.1e-52 206.8 108 95.4
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.1e-51 206.5 108 95.4
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.8e-51 205.7 108 94.4
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 5.3e-51 204.1 108 93.5
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 6.9e-51 203.8 107 94.4
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 6.9e-51 203.8 107 94.4
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 6.9e-51 203.8 107 94.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.5e-50 202.6 108 92.6
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.0e-50 202.2 107 93.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.9e-49 198.4 108 91.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.4e-48 196.1 108 90.7
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.4e-48 196.1 108 88.9
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.4e-48 195.3 102 96.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.2e-42 176.4 105 81.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 3.4e-42 174.9 105 81.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 7.6e-42 173.7 105 81.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.0e-41 173.3 105 79.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.2e-41 172.2 100 81.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 4.9e-41 171.0 107 75.7
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 8.4e-41 170.2 105 78.1
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.1e-40 169.9 105 81.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.1e-40 169.9 108 77.8
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.4e-40 169.5 108 75.9
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 77.8
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.5e-40 168.7 108 77.8
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.2e-40 167.9 108 75.9
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.2e-40 167.9 108 75.9
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.2e-40 167.9 108 75.9
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 9.3e-40 166.8 98 82.7
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 9.3e-40 166.8 108 75.0
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.2e-39 166.4 102 79.4
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.6e-39 166.0 108 73.1
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.1e-39 165.6 106 76.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.1e-39 165.6 106 76.4
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.1e-39 165.6 108 75.9
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.7e-39 165.2 98 78.6
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.7e-39 165.2 98 80.6
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.5e-39 164.9 107 74.8
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.0e-39 164.1 103 73.8
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.9e-39 163.7 107 75.7
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.8e-38 162.5 105 75.2
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.3e-38 162.2 96 78.1
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.3e-38 162.2 103 75.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.0e-38 161.8 97 76.3
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.9e-38 161.4 98 79.6
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 6.7e-38 160.6 105 75.2
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.5e-37 159.5 103 73.8
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.5e-37 159.5 97 77.3
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.5e-37 159.5 100 77.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.5e-37 159.5 108 72.2
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.9e-37 159.1 97 77.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.5e-37 158.7 104 73.1
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 4.3e-37 157.9 97 76.3
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 4.3e-37 157.9 104 72.1
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 7.4e-37 157.1 97 72.2
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 7.4e-37 157.1 97 79.4
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 7.4e-37 157.1 97 79.4
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.4e-37 157.1 97 79.4
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 97 78.4
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 97 78.4
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 2.2e-36 155.6 104 71.2
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.8e-36 154.5 104 70.2
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.3e-36 154.1 97 74.2
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 6.3e-36 154.1 105 70.5
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 6.3e-36 154.1 100 73.0
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 6.3e-36 154.1 97 70.1
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 8.2e-36 153.7 97 72.2
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 8.2e-36 153.7 97 72.2
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 8.2e-36 153.7 90 80.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.4e-35 152.9 105 68.6
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.4e-35 152.9 105 68.6
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.4e-35 152.9 98 74.5
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.4e-35 152.9 102 74.5
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.8e-35 152.5 103 69.9
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.1e-35 151.8 106 66.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 6.9e-35 150.6 97 74.2
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 9.0e-35 150.2 102 76.5
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.5e-34 149.4 93 72.0
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.6e-34 148.7 92 77.2
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.4e-34 148.3 92 75.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 4.5e-34 147.9 104 72.1
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 5.9e-34 147.5 100 74.0
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.7e-33 146.0 97 70.1
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 3.8e-33 144.8 100 75.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 6.5e-33 144.1 135 57.0
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.1e-31 139.0 85 81.2
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.7e-31 138.7 151 51.7
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.9e-29 132.5 87 73.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.3e-29 131.7 100 64.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 3.7e-28 128.3 81 76.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.7e-28 128.3 86 70.9
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.1e-27 126.7 87 72.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.4e-27 126.3 76 77.6
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.8e-27 125.9 86 73.3
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.4e-27 125.6 91 64.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.3e-27 124.4 88 65.9
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.4e-26 121.7 102 62.7
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.9e-25 118.6 88 64.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.4e-24 116.3 58 94.8
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 7.9e-23 110.5 85 65.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.0e-22 110.2 55 94.5
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.8e-22 109.4 86 62.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.0e-22 108.6 80 70.0
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.9e-22 108.2 78 73.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 8.8e-22 107.1 86 55.8
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 5.7e-21 104.4 95 55.8
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-19 99.4 68 69.1
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.4e-19 99.0 73 65.8
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 3.1e-19 98.6 56 83.9
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 2.3e-14 82.4 56 73.2
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.1e-11 72.0 53 66.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.2e-08 60.8 53 58.5
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.6e-07 59.7 53 56.6
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 1.0e-06 57.0 88 30.7


User provided reference genes

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