Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 6.0e-91 337.4 162 100.0
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 8.7e-82 307.0 162 91.4
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 8.7e-82 307.0 162 91.4
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.1e-81 306.6 159 91.8
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.4e-79 299.7 162 87.0
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.4e-79 299.7 162 87.0
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.4e-79 299.7 162 87.0
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 6.9e-79 297.4 161 88.8
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 6.4e-77 290.8 156 88.5
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 2.8e-72 275.4 146 87.7
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 2.8e-72 275.4 146 87.7
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 1.4e-68 263.1 164 76.2
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 1.4e-68 263.1 164 76.2
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 2.4e-68 262.3 164 76.2
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 2.5e-65 252.3 161 76.4
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 3.4e-54 215.3 184 63.6
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 1.8e-50 203.0 124 76.6
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.2e-48 196.1 156 64.7
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.2e-46 190.3 163 65.6
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 5.9e-46 188.0 154 63.6
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.8e-42 176.4 132 68.2
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.5e-41 172.6 161 62.7
C02p02170 Brassica napus HOM05D008885 ORTHO05D006152 8.5e-37 157.5 161 55.9
BolC2t06186H Brassica oleracea HOM05D008885 ORTHO05D006152 5.5e-36 154.8 161 54.7
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 9.4e-36 154.1 162 51.2
BcaC03g13145 Brassica carinata HOM05D008885 ORTHO05D006152 1.5e-33 146.7 87 79.3
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 3.3e-33 145.6 162 48.1
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 1.8e-31 139.8 138 50.7
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.0e-29 134.0 158 47.5
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 7.2e-28 127.9 156 46.8
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 6.7e-26 121.3 135 48.9
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.5e-25 120.2 126 50.0
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 1.1e-23 114.0 147 42.9
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 6.1e-19 98.2 142 35.9
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.0e-17 93.2 141 36.2
Carub.0006s0399 Capsella rubella HOM05D008885 ORTHO05D006152 4.4e-17 92.0 61 70.5
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.5e-17 91.3 143 39.2
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 4.8e-16 88.6 162 37.0
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.3e-16 87.8 140 37.9
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.8e-15 86.7 137 35.8
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.1e-15 84.3 141 38.3
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-14 82.4 127 37.0
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 4.5e-14 82.0 114 40.4
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 5.9e-14 81.6 139 33.8
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 5.9e-14 81.6 162 34.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.9e-14 81.6 152 32.9
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 7.7e-14 81.3 125 34.4
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.0e-13 80.9 165 34.5
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-13 80.5 155 34.8
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-13 80.5 155 34.8
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.3e-13 80.5 155 34.8
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.7e-13 80.1 146 36.3
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-13 79.7 114 39.5
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-13 79.7 155 34.8
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-13 79.3 113 39.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.8e-13 79.0 145 35.2
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.8e-13 79.0 150 36.7
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.5e-13 78.2 126 38.9
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-12 77.4 146 34.2
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-12 77.0 140 34.3
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-12 77.0 155 34.2
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-12 77.0 140 34.3
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.5e-12 75.1 135 37.8
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 5.5e-12 75.1 147 33.3
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.2e-12 74.7 127 36.2
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.2e-12 74.7 134 35.8
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-11 73.9 140 32.1
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-11 73.6 155 32.9
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 6.1e-11 71.6 146 34.2
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 5.2e-10 68.6 95 37.9
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.2e-10 68.6 95 37.9
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.8e-10 68.2 158 30.4
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-09 66.6 96 33.3
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.4e-09 65.5 104 37.5
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.4e-09 65.5 112 35.7
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 5.7e-09 65.1 98 33.7
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.7e-09 65.1 139 28.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-08 63.9 144 31.9
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-08 63.5 99 34.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.2e-08 63.2 121 33.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-08 62.8 121 33.9
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-08 62.8 121 33.9
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 3.7e-08 62.4 132 31.8
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 4.9e-08 62.0 110 33.6
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-07 60.5 124 29.8
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-07 60.5 135 31.1
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.8e-07 60.1 137 32.1
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-07 59.3 142 30.3
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-07 59.3 137 32.1
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-07 59.3 142 30.3
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-07 59.3 137 32.1
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.4e-07 58.5 97 37.1
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-06 57.4 123 30.9
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 2.7e-06 56.2 139 28.8
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.7e-06 56.2 116 30.2
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 2.7e-06 56.2 100 36.0
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-06 55.8 125 32.0
Lju4319C0T1 Lonicera japonica HOM05D011954 ORTHO05D014236 4.5e-06 55.5 130 30.0
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 5.9e-06 55.1 116 30.2
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 5.9e-06 55.1 139 27.3
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 5.9e-06 55.1 139 27.3


User provided reference genes

Program Settings