Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21578 Brassica carinata HOM05D009919 ORTHO05D012044 1.3e-49 199.9 136 100.0
BcaC03g13207 Brassica carinata HOM05D009919 ORTHO05D012044 9.6e-42 173.7 136 83.1
C02p03410 Brassica napus HOM05D009919 ORTHO05D012044 4.8e-41 171.4 134 76.9
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 8.1e-41 170.6 133 82.7
BolC2t06302H Brassica oleracea HOM05D009919 ORTHO05D012044 2.4e-40 169.1 133 82.7
BcaB08g37279 Brassica carinata HOM05D009919 ORTHO05D012044 1.3e-33 146.7 134 82.8
C09p68800 Brassica napus HOM05D009919 ORTHO05D012044 2.9e-30 135.6 134 64.2
Sp6g34800 Schrenkiella parvula HOM05D009919 ORTHO05D012044 6.0e-28 127.9 79 83.5
BcaB08g37281 Brassica carinata HOM05D009919 ORTHO05D012044 3.3e-26 122.1 134 60.4
BolC9t59627H Brassica oleracea HOM05D009919 ORTHO05D012044 3.3e-26 122.1 134 60.4
A10p28520 Brassica napus HOM05D009919 ORTHO05D012044 2.8e-25 119.0 128 77.3
BraA10t44901Z Brassica rapa HOM05D009919 ORTHO05D012044 2.8e-25 119.0 128 77.3
AT5G08150 Arabidopsis thaliana HOM05D009919 ORTHO05D012044 1.1e-24 117.1 140 72.1
Carub.0006s0705 Capsella rubella HOM05D009919 ORTHO05D012044 2.4e-24 115.9 141 66.0
CARHR205030 Cardamine hirsuta HOM05D009919 ORTHO05D012044 1.2e-23 113.6 139 71.9
AL6G18540 Arabidopsis lyrata HOM05D009919 ORTHO05D012044 1.9e-21 106.3 136 70.6
BcaB01g05674 Brassica carinata HOM05D009919 ORTHO05D012044 4.3e-18 95.1 145 60.7
BcaB01g05626 Brassica carinata HOM05D009919 ORTHO05D012044 2.4e-16 89.4 156 43.6
A03p03640 Brassica napus HOM05D009919 ORTHO05D012044 3.4e-15 85.5 80 66.2
C03p04120 Brassica napus HOM05D009919 ORTHO05D012044 3.4e-15 85.5 80 66.2
BolC3t12944H Brassica oleracea HOM05D009919 ORTHO05D012044 3.4e-15 85.5 80 66.2
BraA03t09712Z Brassica rapa HOM05D009919 ORTHO05D012044 3.2e-13 79.0 80 62.5
Aa31LG3G18390 Aethionema arabicum HOM05D009919 ORTHO05D012044 3.0e-11 72.4 162 56.8
THA.LOC104819391 Tarenaya hassleriana HOM05D009919 ORTHO05D012044 4.4e-10 68.6 83 54.2
THA.LOC104804610 Tarenaya hassleriana HOM05D009919 ORTHO05D012044 1.3e-09 67.0 74 56.8


User provided reference genes

Program Settings