Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21572 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-101 373.2 180 100.0
BcaB05g21645 Brassica carinata HOM05D000171 ORTHO05D000101 6.3e-41 171.4 133 67.7
BcaNung05190 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-39 167.2 215 49.3
BcaC09g50641 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-39 166.0 213 52.6
BcaC09g50888 Brassica carinata HOM05D000171 ORTHO05D000101 5.9e-39 164.9 182 55.5
BcaC06g35480 Brassica carinata HOM05D000171 ORTHO05D000101 9.4e-37 157.5 135 65.2
BolC7t42046H Brassica oleracea HOM05D000171 ORTHO05D000101 9.4e-37 157.5 135 65.2
C07p15590 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-36 155.6 135 64.4
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 2.0e-34 149.8 195 49.7
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 4.4e-34 148.7 135 62.2
BcaC09g51689 Brassica carinata HOM05D000171 ORTHO05D000101 6.3e-33 144.8 214 47.7
BcaNung06828 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-32 144.1 219 46.6
BcaNung05078 Brassica carinata HOM05D000171 ORTHO05D000101 4.1e-32 142.1 131 61.8
AL8G27960 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-30 136.7 134 56.7
Thhalv10007869m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-28 130.2 142 56.3
BcaB05g21647 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-28 128.6 91 70.3
Thhalv10002533m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.7e-28 128.6 212 42.0
BcaNung00927 Brassica carinata HOM05D000171 ORTHO05D000101 6.1e-28 128.3 203 43.8
Carub.0001s2069 Capsella rubella HOM05D000171 ORTHO05D000101 3.0e-27 125.9 143 51.0
Carub.0001s2866 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-23 113.2 137 52.6
CARHR029830 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.9e-23 111.7 190 38.9
BcaB04g21056 Brassica carinata HOM05D000171 ORTHO05D000101 5.0e-22 108.6 208 39.4
Carub.0001s3352 Capsella rubella HOM05D000171 ORTHO05D000101 5.0e-22 108.6 137 51.1
BcaNung00757 Brassica carinata HOM05D000171 ORTHO05D019702 7.3e-21 104.8 93 60.2
AT1G30790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.6e-20 103.6 138 45.7
CARHR029970 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-19 100.9 215 36.7
AL1G44920 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-19 100.5 136 45.6
Carub.0001s2863 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-19 100.1 134 47.8
AL1G44860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.0e-19 99.4 133 40.6
CARHR144020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-19 98.2 138 46.4
AL1G44890 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-18 95.9 137 43.8
Carub.0001s3191 Capsella rubella HOM05D000171 ORTHO05D000101 5.7e-18 95.1 135 40.0
AL1G44470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-17 93.6 107 52.3
AL1G44930 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-16 90.5 96 50.0
AL1G48130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.0e-16 88.2 137 37.2
Thhalv10023943m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.8e-15 84.7 142 42.3
CARHR253630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.3e-13 79.3 143 36.4
Carub.0001s3806 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-13 79.0 136 37.5
CARHR029840 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.3e-13 78.2 130 39.2
Thhalv10009419m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-12 77.0 138 38.4
AL1G49450 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.7e-12 75.5 135 37.0
A07p09960 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-12 75.1 139 39.6
Carub.0004s0470 Capsella rubella HOM05D000171 ORTHO05D000101 6.2e-12 75.1 140 35.7
BraA07t28785Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-11 74.3 139 38.8
Carub.0002s0113 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-11 73.9 148 37.2
BolC7t42021H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-11 73.6 139 38.8
Thhalv10027566m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-11 73.6 107 44.9
CARHR030250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.3e-11 73.2 137 37.2
BraA07t28504Z Brassica rapa HOM05D000171 ORTHO05D000101 5.2e-11 72.0 134 40.3
AL1G44400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-11 71.6 135 41.5
Carub.0004s0469 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-09 67.4 141 36.2
C07p10820 Brassica napus HOM05D000171 ORTHO05D000101 8.3e-09 64.7 135 38.5
BcaC06g35792 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-08 63.2 135 38.5
BolC7t41548H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-08 63.2 135 38.5
Carub.0008s0623 Capsella rubella HOM05D000171 ORTHO05D000101 7.0e-08 61.6 118 34.7
AT1G32660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.2e-07 60.8 137 35.0
BcaB05g25188 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-07 60.8 133 36.1
AL6G33830 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-07 60.5 117 35.0
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-07 60.5 139 34.5
Thhalv10019545m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.6e-07 58.9 108 32.4
CARHR222570 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.0e-06 55.5 107 33.6


User provided reference genes

Program Settings