Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21547 Brassica carinata HOM05D009072 ORTHO05D012584 4.8e-17 93.2 51 100.0
C03p04620 Brassica napus HOM05D000856 ORTHO05D001792 1.3e-14 85.1 51 92.2
BolC3t12993H Brassica oleracea HOM05D000856 ORTHO05D104791 1.3e-14 85.1 51 92.2
A03p04160 Brassica napus HOM05D000856 ORTHO05D001792 1.7e-14 84.7 51 90.2
BraA03t09761Z Brassica rapa HOM05D009072 ORTHO05D012584 1.7e-14 84.7 51 90.2
A10p27800 Brassica napus HOM05D009072 ORTHO05D012584 2.9e-14 84.0 51 90.2
BraA10t44830Z Brassica rapa HOM05D009072 ORTHO05D012584 2.9e-14 84.0 51 90.2
BolC2t06353H Brassica oleracea HOM05D009072 ORTHO05D012584 3.8e-14 83.6 50 90.0
Thhalv10014478m.g Eutrema salsugineum HOM05D009072 ORTHO05D012584 1.4e-13 81.6 50 90.0
Sp6g33820 Schrenkiella parvula HOM05D009072 ORTHO05D012584 1.9e-13 81.3 51 86.3
A02p00010 Brassica napus HOM05D000856 ORTHO05D001792 4.2e-13 80.1 50 86.0
BcaB08g37200 Brassica carinata HOM05D009072 ORTHO05D012584 7.1e-13 79.3 51 86.3
C09p67900 Brassica napus HOM05D009072 ORTHO05D013961 7.1e-13 79.3 51 86.3
BolC9t59550H Brassica oleracea HOM05D009072 ORTHO05D013961 7.1e-13 79.3 51 86.3
C09p66290 Brassica napus HOM05D009072 ORTHO05D012584 1.6e-12 78.2 50 86.0
BraA02t04984Z Brassica rapa HOM05D009072 ORTHO05D012584 1.6e-12 78.2 51 84.3
BcaC03g13260 Brassica carinata HOM05D009072 ORTHO05D012584 2.7e-12 77.4 50 84.0
AL6G19930 Arabidopsis lyrata HOM05D009072 ORTHO05D012584 2.3e-11 74.3 51 84.3
AT5G09530 Arabidopsis thaliana HOM05D009072 ORTHO05D012584 3.0e-11 73.9 51 84.3
BcaB01g05572 Brassica carinata HOM05D000856 ORTHO05D001792 6.7e-11 72.8 51 84.3
CARHR203860 Cardamine hirsuta HOM05D009072 ORTHO05D012584 3.3e-10 70.5 51 78.4
Carub.0006s0810 Capsella rubella HOM05D009072 ORTHO05D012584 1.4e-08 65.1 50 76.0
Carub.0003s2767 Capsella rubella HOM05D009072 ORTHO05D012584 4.0e-08 63.5 50 74.0
AT5G09520 Arabidopsis thaliana HOM05D009072 ORTHO05D012584 3.8e-06 57.0 49 69.4


User provided reference genes

Program Settings