Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21528 Brassica carinata HOM05D004540 ORTHO05D004852 1.5e-29 132.9 108 100.0
A02p00160 Brassica napus HOM05D004540 ORTHO05D004852 2.1e-15 85.9 108 50.9
BcaC03g13276 Brassica carinata HOM05D004540 ORTHO05D004852 2.8e-12 75.5 46 80.4
C02p04070 Brassica napus HOM05D004540 ORTHO05D004852 2.8e-12 75.5 46 80.4
BolC2t06369H Brassica oleracea HOM05D004540 ORTHO05D004852 2.8e-12 75.5 46 80.4
BcaB08g37167 Brassica carinata HOM05D004540 ORTHO05D004852 6.3e-12 74.3 108 49.1
BraA02t05000Z Brassica rapa HOM05D004540 ORTHO05D004852 1.8e-11 72.8 46 76.1
A10p27650 Brassica napus HOM05D004540 ORTHO05D004852 9.1e-11 70.5 108 46.3
BcaB08g37180 Brassica carinata HOM05D004540 ORTHO05D004852 1.6e-10 69.7 108 77.8
C09p67710 Brassica napus HOM05D004540 ORTHO05D004852 1.6e-10 69.7 108 77.8
BolC9t59533H Brassica oleracea HOM05D004540 ORTHO05D004852 1.6e-10 69.7 108 77.8
BcaB01g05659 Brassica carinata HOM05D004540 ORTHO05D004852 2.0e-10 69.3 109 78.0
BcaB01g05561 Brassica carinata HOM05D004540 ORTHO05D004852 5.9e-10 67.8 109 47.7
C03p04700 Brassica napus HOM05D004540 ORTHO05D004852 5.9e-10 67.8 109 47.7
BraA03t09770Z Brassica rapa HOM05D004540 ORTHO05D004852 7.7e-10 67.4 109 78.9
BraA10t44817Z Brassica rapa HOM05D004540 ORTHO05D004852 7.7e-10 67.4 108 75.9
CARHR203600 Cardamine hirsuta HOM05D004540 ORTHO05D004852 7.7e-10 67.4 46 71.7
BolC3t13005H Brassica oleracea HOM05D004540 ORTHO05D004852 1.0e-09 67.0 109 78.0
Thhalv10015116m.g Eutrema salsugineum HOM05D004540 ORTHO05D004852 1.3e-09 66.6 109 51.4
Sp6g33605 Schrenkiella parvula HOM05D004540 ORTHO05D004852 1.3e-09 66.6 47 76.6
A03p04260 Brassica napus HOM05D004540 ORTHO05D004852 8.5e-09 63.9 109 78.0
AL6G20210 Arabidopsis lyrata HOM05D004540 ORTHO05D004852 3.2e-08 62.0 108 43.5
AT5G09805 Arabidopsis thaliana HOM05D004540 ORTHO05D004852 3.6e-07 58.5 103 42.7
Carub.0006s0822 Capsella rubella HOM05D004540 ORTHO05D004852 1.0e-06 57.0 41 68.3


User provided reference genes

Program Settings