Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g21458 Brassica carinata HOM05D000040 ORTHO05D093768 2.2e-68 262.3 148 100.0
C01p52470 Brassica napus HOM05D000040 ORTHO05D005442 8.9e-33 144.1 100 82.0
BolC1t05185H Brassica oleracea HOM05D000040 ORTHO05D005442 8.9e-33 144.1 100 82.0
BNapus_Darmor_BZH_scaffold_149p00230 Brassica napus HOM05D000040 ORTHO05D005442 6.4e-31 137.9 100 80.0
BraA01t04114Z Brassica rapa HOM05D000040 ORTHO05D005442 1.9e-30 136.3 100 79.0
Thhalv10020732m.g Eutrema salsugineum HOM05D000040 ORTHO05D005442 9.8e-24 114.0 102 66.7
BolC3t16859H Brassica oleracea HOM05D000040 ORTHO05D005442 6.4e-23 111.3 103 65.0
BraA03t12932Z Brassica rapa HOM05D000040 ORTHO05D005442 6.4e-23 111.3 103 65.0
BcaC01g04030 Brassica carinata HOM05D000040 ORTHO05D005442 8.3e-23 110.9 103 64.1
C03p45840 Brassica napus HOM05D000040 ORTHO05D005442 8.3e-23 110.9 103 64.1
Sp3g10860 Schrenkiella parvula HOM05D000040 ORTHO05D005442 3.2e-22 109.0 104 62.5
A03p37770 Brassica napus HOM05D000040 ORTHO05D005442 5.4e-22 108.2 103 63.1
BcaC05g29246 Brassica carinata HOM05D000040 ORTHO05D005442 6.6e-20 101.3 102 61.8
C05p55220 Brassica napus HOM05D000040 ORTHO05D005442 6.6e-20 101.3 102 61.8
BolC5t34190H Brassica oleracea HOM05D000040 ORTHO05D005442 1.5e-19 100.1 99 60.6
BcaB06g25522 Brassica carinata HOM05D000040 ORTHO05D005442 4.3e-19 98.6 99 59.6
BraA05t22481Z Brassica rapa HOM05D000040 ORTHO05D005442 1.6e-18 96.7 95 60.0
A05p36770 Brassica napus HOM05D000040 ORTHO05D005442 8.1e-18 94.4 104 53.8
BraA05t22480Z Brassica rapa HOM05D000040 ORTHO05D005442 8.1e-18 94.4 104 53.8
BcaB06g25521 Brassica carinata HOM05D000040 ORTHO05D005442 1.4e-17 93.6 104 56.7
A05p36780 Brassica napus HOM05D000040 ORTHO05D005442 1.4e-17 93.6 95 57.9
AL3G24380 Arabidopsis lyrata HOM05D000040 ORTHO05D005442 1.8e-17 93.2 100 54.0
BcaC05g29245 Brassica carinata HOM05D000040 ORTHO05D005442 2.3e-17 92.8 104 52.9
C05p55210 Brassica napus HOM05D000040 ORTHO05D005442 2.3e-17 92.8 104 52.9
BolC5t34189H Brassica oleracea HOM05D000040 ORTHO05D005442 2.3e-17 92.8 104 52.9
AT3G12700 Arabidopsis thaliana HOM05D000040 ORTHO05D005442 5.2e-17 91.7 102 52.9
BcaB07g30032 Brassica carinata HOM05D000040 ORTHO05D005442 1.2e-16 90.5 96 59.4
Carub.0003s1206 Capsella rubella HOM05D000040 ORTHO05D005442 1.2e-16 90.5 100 56.0
BcaB06g25520 Brassica carinata HOM05D000040 ORTHO05D005442 2.1e-13 79.7 77 55.8
CARHR087220 Cardamine hirsuta HOM05D000040 ORTHO05D005442 2.3e-12 76.3 104 48.1
BcaB04g18716 Brassica carinata HOM05D000040 ORTHO05D005442 9.9e-08 60.8 50 64.0


User provided reference genes

Program Settings