Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 7.8e-55 216.9 107 100.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 7.1e-24 114.0 58 87.9
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 2.1e-23 112.5 58 86.2
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.7e-23 112.1 58 86.2
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.5e-23 111.7 58 86.2
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 3.5e-23 111.7 58 86.2
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 86.2
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 4.6e-23 111.3 58 84.5
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 1.0e-22 110.2 51 92.2
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 3.0e-22 108.6 58 82.8
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 3.9e-22 108.2 58 82.8
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 3.9e-22 108.2 58 81.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 5.1e-22 107.8 58 81.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 5.1e-22 107.8 58 81.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 5.1e-22 107.8 58 81.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 6.7e-22 107.5 58 81.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.1e-21 106.7 58 81.0
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 1.1e-21 106.7 58 81.0
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.5e-21 106.3 58 81.0
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 1.5e-21 106.3 58 81.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 1.5e-21 106.3 58 79.3
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 1.5e-21 106.3 58 79.3
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.5e-21 106.3 58 81.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.9e-21 105.9 58 81.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.9e-21 105.9 58 81.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.9e-21 105.9 58 79.3
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.9e-21 105.9 58 82.8
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 3.3e-21 105.1 58 79.3
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 3.3e-21 105.1 57 80.7
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 7.4e-21 104.0 57 78.9
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 7.4e-21 104.0 58 77.6
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 9.6e-21 103.6 58 77.6
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 9.6e-21 103.6 58 77.6
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 9.6e-21 103.6 58 77.6
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 9.6e-21 103.6 58 77.6
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 9.6e-21 103.6 58 77.6
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.3e-20 103.2 58 79.3
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.6e-20 102.8 58 77.6
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.6e-20 102.8 58 77.6
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.6e-20 102.8 50 86.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 1.6e-20 102.8 58 79.3
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.1e-20 102.4 58 75.9
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.1e-20 102.4 58 75.9
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 2.8e-20 102.1 58 75.9
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 4.8e-20 101.3 57 77.2
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 8.1e-20 100.5 58 75.9
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 8.1e-20 100.5 58 75.9
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 8.1e-20 100.5 58 75.9
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 8.1e-20 100.5 58 75.9
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 8.1e-20 100.5 58 77.6
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.1e-19 100.1 58 74.1
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.1e-19 100.1 50 84.0
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.4e-19 99.8 58 75.9
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.8e-19 99.4 58 72.4
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.8e-19 99.4 58 74.1
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 3.1e-19 98.6 58 74.1
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.1e-19 98.6 58 72.4
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.1e-19 98.6 58 72.4
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 4.0e-19 98.2 58 72.4
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 6.9e-19 97.4 58 72.4
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 6.9e-19 97.4 50 78.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 6.9e-19 97.4 58 74.1
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 6.9e-19 97.4 58 70.7
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.0e-18 95.9 58 70.7
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 2.6e-18 95.5 49 77.6
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 2.6e-18 95.5 49 77.6
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 5.8e-18 94.4 58 67.2
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 9.9e-18 93.6 58 72.4
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.2e-17 92.4 58 67.2
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 6.4e-17 90.9 50 70.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.2e-16 88.6 58 65.5
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 3.2e-16 88.6 50 68.0
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 4.2e-16 88.2 58 62.1
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 7.1e-16 87.4 58 63.8
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 7.1e-16 87.4 58 63.8
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 1.2e-15 86.7 50 66.0
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 4.6e-15 84.7 50 64.0
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 6.0e-15 84.3 50 64.0
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 2.3e-14 82.4 46 80.4
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.0e-14 82.0 50 62.0
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.1e-11 73.6 52 63.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.1e-11 73.6 52 63.5
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 1.1e-11 73.6 51 54.9
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 4.0e-11 71.6 37 81.1
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 5.3e-11 71.2 48 58.3
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 9.0e-11 70.5 48 58.3
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 7.6e-10 67.4 31 90.3
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 8.4e-09 63.9 44 56.8
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 4.6e-07 58.2 45 53.3
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.3e-06 56.6 48 52.1
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 3.9e-06 55.1 50 44.0


User provided reference genes

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