Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g21196 Brassica carinata HOM05D008653 ORTHO05D012633 2.7e-161 572.0 302 100.0
BraA08t33300Z Brassica rapa HOM05D008246 ORTHO05D011073 1.7e-54 217.2 238 59.2
BolC6t37680H Brassica oleracea HOM05D008653 ORTHO05D012633 1.2e-52 211.1 222 55.0
BolC8t47720H Brassica oleracea HOM05D008246 ORTHO05D011073 1.6e-52 210.7 238 58.4
BolC8t50132H Brassica oleracea HOM05D008246 ORTHO05D011073 7.3e-50 201.8 260 55.8
C02p09520 Brassica napus HOM05D008653 ORTHO05D012633 4.0e-48 196.1 323 42.7
BolC4t24987H Brassica oleracea HOM05D008246 ORTHO05D011073 2.0e-47 193.7 238 55.5
BcaC02g09990 Brassica carinata HOM05D008246 ORTHO05D011073 3.4e-47 193.0 238 55.5
C01p06420 Brassica napus HOM05D008653 ORTHO05D012633 5.1e-43 179.1 217 51.6
BcaNung01292 Brassica carinata HOM05D008246 ORTHO05D011073 2.2e-38 163.7 159 67.9
BraA03t15303Z Brassica rapa HOM05D008246 ORTHO05D011073 1.2e-28 131.3 176 49.4
A09p00890 Brassica napus HOM05D008653 ORTHO05D012633 9.6e-26 121.7 246 40.2
C07p21940 Brassica napus HOM05D008653 ORTHO05D097932 2.8e-25 120.2 101 65.3
BcaB03g14644 Brassica carinata HOM05D008246 ORTHO05D011073 3.3e-18 96.7 223 38.1
BcaB04g21199 Brassica carinata HOM05D008653 ORTHO05D014945 6.3e-17 92.4 179 40.8
BolC6t38898H Brassica oleracea HOM05D008246 ORTHO05D021649 1.1e-16 91.7 138 47.8
BolC6t38180H Brassica oleracea HOM05D008246 ORTHO05D021649 3.1e-16 90.1 123 50.4
C09p66310 Brassica napus HOM05D008246 ORTHO05D011073 1.3e-14 84.7 202 33.7
BolC1t05206H Brassica oleracea HOM05D008246 ORTHO05D011073 1.3e-14 84.7 202 33.7
A07p14920 Brassica napus HOM05D004006 ORTHO05D004585 1.9e-13 80.9 45 84.4
A08p36010 Brassica napus HOM05D008246 ORTHO05D011073 1.9e-13 80.9 250 32.8
BraA07t29234Z Brassica rapa HOM05D008653 ORTHO05D012633 1.9e-13 80.9 45 84.4
BcaC09g51200 Brassica carinata HOM05D008246 ORTHO05D011073 1.6e-12 77.8 226 31.9
BNapus_Darmor_BZH_scaffold_113p00040 Brassica napus HOM05D008246 ORTHO05D011073 2.1e-12 77.4 204 33.3
BcaNung06310 Brassica carinata HOM05D008246 ORTHO05D011073 7.9e-12 75.5 211 34.1
BolC7t42828H Brassica oleracea HOM05D008246 ORTHO05D041058 1.8e-11 74.3 141 38.3
C07p22880 Brassica napus HOM05D008246 ORTHO05D041058 1.1e-10 71.6 103 45.6
BcaB03g12150 Brassica carinata HOM05D013145 ORTHO05D014945 4.8e-09 66.2 277 32.5
BcaC05g27263 Brassica carinata HOM05D013145 ORTHO05D014945 4.8e-09 66.2 109 40.4
BraA05t22545Z Brassica rapa HOM05D013145 ORTHO05D014945 6.3e-09 65.9 107 41.1
BcaC07g42591 Brassica carinata HOM05D013145 ORTHO05D014945 1.1e-08 65.1 114 40.4
BolC1t03334H Brassica oleracea HOM05D013145 ORTHO05D014945 1.1e-08 65.1 299 30.8
BcaB06g29024 Brassica carinata HOM05D013145 ORTHO05D014945 3.4e-07 60.1 108 53.7
BolC4t24428H Brassica oleracea HOM05D013145 ORTHO05D014945 4.5e-07 59.7 298 30.2
BcaC01g00630 Brassica carinata HOM05D008246 ORTHO05D011073 1.0e-06 58.5 161 34.2
C09p01930 Brassica napus HOM05D008246 ORTHO05D000094 1.0e-06 58.5 132 34.8
BcaC02g12312 Brassica carinata HOM05D015116 ORTHO05D039208 2.2e-06 57.4 96 46.9
BcaC04g22750 Brassica carinata HOM05D008246 ORTHO05D011073 2.9e-06 57.0 120 36.7
BcaC06g34991 Brassica carinata HOM05D008246 ORTHO05D027281 2.9e-06 57.0 226 30.1


User provided reference genes

Program Settings