Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g21102 Brassica carinata HOM05D000179 ORTHO05D091229 6.8e-24 113.2 60 100.0
A06p10620 Brassica napus HOM05D000179 ORTHO05D023859 1.3e-19 99.0 59 84.7
BcaC05g25369 Brassica carinata HOM05D000179 ORTHO05D000107 2.3e-19 98.2 57 87.7
BcaC05g25370 Brassica carinata HOM05D000179 ORTHO05D000107 2.3e-19 98.2 57 87.7
BolC5t29998H Brassica oleracea HOM05D000179 ORTHO05D041569 2.3e-19 98.2 57 87.7
C05p12540 Brassica napus HOM05D000179 ORTHO05D023859 3.9e-19 97.4 59 84.7
BraA06t24242Z Brassica rapa HOM05D000179 ORTHO05D000107 3.9e-19 97.4 57 86.0
BcaC05g25367 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-18 95.1 57 84.2
A06p10640 Brassica napus HOM05D000179 ORTHO05D000107 1.9e-18 95.1 58 87.9
C05p12490 Brassica napus HOM05D000179 ORTHO05D041569 1.9e-18 95.1 57 84.2
BraA06t24244Z Brassica rapa HOM05D000179 ORTHO05D000107 1.9e-18 95.1 58 87.9
BcaB02g06518 Brassica carinata HOM05D000179 ORTHO05D000107 2.5e-18 94.7 57 86.0
BcaB02g06525 Brassica carinata HOM05D000179 ORTHO05D000107 2.5e-18 94.7 57 86.0
BolC5t29996H Brassica oleracea HOM05D000179 ORTHO05D000107 2.5e-18 94.7 57 84.2
BcaC05g25368 Brassica carinata HOM05D000179 ORTHO05D000107 4.3e-18 94.0 57 82.5
BcaB02g06520 Brassica carinata HOM05D000179 ORTHO05D000107 1.2e-17 92.4 57 84.2
BcaB03g16360 Brassica carinata HOM05D000179 ORTHO05D000107 1.2e-17 92.4 57 86.0
BcaB06g28761 Brassica carinata HOM05D000179 ORTHO05D000107 8.1e-17 89.7 57 80.7
BcaB02g06527 Brassica carinata HOM05D000179 ORTHO05D000107 8.9e-16 86.3 57 78.9
BcaB02g06519 Brassica carinata HOM05D000179 ORTHO05D000107 5.8e-15 83.6 57 77.2
BcaB02g06526 Brassica carinata HOM05D000179 ORTHO05D000107 6.4e-14 80.1 57 75.4
Thhalv10007538m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 1.0e-11 72.8 61 70.5
CARHR015080 Cardamine hirsuta HOM05D000179 ORTHO05D000107 1.6e-09 65.5 59 64.4
C08p16780 Brassica napus HOM05D002557 ORTHO05D002563 4.4e-07 57.4 61 59.0
BcaB07g32855 Brassica carinata HOM05D000179 ORTHO05D000107 1.7e-06 55.5 51 64.7
BcaC07g38747 Brassica carinata HOM05D000179 ORTHO05D000107 1.7e-06 55.5 61 57.4
BcaC07g38748 Brassica carinata HOM05D000179 ORTHO05D000107 1.7e-06 55.5 61 57.4
CARHR033960 Cardamine hirsuta HOM05D000179 ORTHO05D000107 2.9e-06 54.7 60 53.3
BcaB02g06899 Brassica carinata HOM05D000179 ORTHO05D000107 8.4e-06 53.1 51 62.7
C05p31260 Brassica napus HOM05D000179 ORTHO05D024334 8.4e-06 53.1 50 60.0


User provided reference genes

Program Settings