Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 1.9e-36 155.2 74 100.0
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 5.1e-21 104.0 77 71.4
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 5.1e-21 104.0 77 71.4
BcaC09g48311 Brassica carinata HOM05D023045 ORTHO05D024329 4.3e-20 100.9 80 68.8
BolC1t05106H Brassica oleracea HOM05D023045 ORTHO05D024329 4.3e-20 100.9 80 68.8
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 9.6e-12 73.2 67 46.3
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.0e-10 67.8 66 43.9
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.2e-09 66.2 66 42.4
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.0e-09 65.5 71 39.4
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.6e-09 65.1 66 42.4
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.8e-09 63.9 73 45.2
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 1.0e-08 63.2 66 42.4
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 1.0e-08 63.2 66 42.4
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.3e-08 62.8 66 42.4
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.1e-07 59.7 73 42.5
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.1e-07 59.7 70 45.7
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 1.9e-07 58.9 51 47.1
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 3.2e-07 58.2 74 43.2
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 3.2e-07 58.2 73 38.4
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.6e-06 55.8 71 40.8


User provided reference genes

Program Settings