Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 1.8e-285 985.3 529 100.0
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 4.4e-191 671.8 643 65.3
Thhalv10020211m.g Eutrema salsugineum HOM05D004118 ORTHO05D004686 3.4e-183 645.6 642 62.9
C01p49420 Brassica napus HOM05D004118 ORTHO05D004686 1.0e-176 624.0 528 71.8
BolC1t04899H Brassica oleracea HOM05D004118 ORTHO05D004686 4.1e-173 612.1 529 71.3
BcaC09g48474 Brassica carinata HOM05D004118 ORTHO05D004686 5.4e-173 611.7 529 71.5
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 3.5e-164 582.4 622 60.8
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 1.2e-145 520.8 607 58.5
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 3.5e-140 502.7 630 55.6
AL3G27450 Arabidopsis lyrata HOM05D004118 ORTHO05D004686 6.0e-140 501.9 647 55.8
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 2.3e-131 473.4 615 55.4
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 1.1e-128 464.5 605 55.0
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 3.4e-127 459.5 601 55.1
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 3.4e-127 459.5 601 55.1
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 4.5e-127 459.1 612 53.6
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 2.0e-87 327.4 415 55.4
THA.LOC104798758 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 6.5e-86 322.4 510 48.2
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 3.2e-77 293.5 718 35.0
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 5.5e-77 292.7 711 35.7
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 1.0e-75 288.5 738 34.7
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 4.0e-75 286.6 706 34.6
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 2.0e-74 284.3 692 36.4
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 7.5e-74 282.3 717 34.6
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 7.5e-74 282.3 709 35.1
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 2.2e-73 280.8 710 35.1
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 4.8e-73 279.6 675 36.3
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 6.3e-73 279.3 701 35.1
Gohir.D01G046700 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.1e-72 278.5 652 36.2
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 1.1e-72 278.5 696 35.5
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 1.4e-72 278.1 694 36.3
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 1.8e-72 277.7 685 36.2
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.1e-72 276.9 695 35.3
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 4.1e-72 276.6 695 35.8
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 5.3e-72 276.2 708 34.7
Sopen07g030960 Solanum pennellii HOM05D004118 ORTHO05D004686 9.1e-72 275.4 684 35.1
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 1.6e-71 274.6 696 34.8
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 2.0e-71 274.2 709 33.6
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.0e-71 274.2 695 33.8
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 3.5e-71 273.5 728 33.9
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 3.5e-71 273.5 726 34.2
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 1.0e-70 271.9 698 35.5
RcHm_v2.0_Chr5g0032241 Rosa chinensis HOM05D004118 ORTHO05D004686 1.0e-70 271.9 713 34.2
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 2.9e-70 270.4 691 35.6
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 6.5e-70 269.2 686 34.3
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 6.5e-70 269.2 710 34.4
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 1.9e-69 267.7 695 35.0
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 4.2e-69 266.5 706 33.1
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 2.1e-68 264.2 737 33.2
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 3.6e-68 263.5 685 35.5
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 4.7e-68 263.1 696 33.0
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 1.4e-67 261.5 715 34.0
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.4e-67 261.5 696 33.5
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.4e-67 261.5 696 35.3
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 2.3e-67 260.8 652 35.9
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 3.0e-67 260.4 588 38.9
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 4.4e-66 256.5 736 33.8
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 2.2e-65 254.2 702 33.6
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 2.8e-65 253.8 549 37.9
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 6.3e-65 252.7 711 35.7
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 8.3e-65 252.3 687 34.6
DCAR_021002 Daucus carota HOM05D004118 ORTHO05D004686 1.1e-64 251.9 721 34.4
ECA236G3195 Erigeron canadensis HOM05D004118 ORTHO05D004686 2.4e-64 250.8 638 34.2
SGA_v2.0_scaffold73G24222 Striga asiatica HOM05D004118 ORTHO05D004686 9.1e-64 248.8 724 32.6
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 5.9e-63 246.1 721 32.7
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 5.9e-63 246.1 647 34.0
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 1.3e-62 245.0 693 33.8
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 1.7e-62 244.6 661 35.6
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 1.7e-62 244.6 557 37.3
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 3.8e-62 243.4 713 33.8
Sopen12g005780 Solanum pennellii HOM05D004118 ORTHO05D004686 5.0e-62 243.0 645 34.7
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 8.6e-62 242.3 717 34.0
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 1.5e-61 241.5 728 32.7
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 5.5e-61 239.6 757 33.3
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 2.8e-60 237.3 689 33.7
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 6.1e-60 236.1 702 33.9
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 3.0e-59 233.8 664 34.6
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 4.0e-59 233.4 682 32.8
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 6.8e-59 232.6 695 34.0
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 3.4e-58 230.3 685 33.1
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 9.8e-58 228.8 639 36.2
arahy.Tifrunner.gnm1.ann1.YMW7LF Arachis hypogaea HOM05D004118 ORTHO05D004686 2.8e-57 227.3 595 38.0
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 3.7e-57 226.9 701 32.8
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 8.3e-57 225.7 771 30.5
CSS0009782 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.4e-56 224.9 665 33.8
Cc05_g11580 Coffea canephora HOM05D004118 ORTHO05D004686 1.4e-56 224.9 804 30.8
MSTRG.12889 Avicennia marina HOM05D004118 ORTHO05D004686 2.4e-56 224.2 715 32.0
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 2.4e-56 224.2 624 32.7
Lsat_1_v5_gn_5_128820 Lactuca sativa HOM05D004118 ORTHO05D004686 3.1e-56 223.8 638 35.6
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 3.1e-56 223.8 621 37.0
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 4.1e-56 223.4 673 34.2
DCAR_019575 Daucus carota HOM05D004118 ORTHO05D004686 5.4e-56 223.0 539 36.9
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 1.6e-55 221.5 726 33.1
Nitab4.5_0000332g0190 Nicotiana tabacum HOM05D004118 ORTHO05D004686 5.9e-55 219.5 676 32.0
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 7.8e-55 219.2 637 32.8
Nitab4.5_0003033g0050 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.8e-54 216.9 680 31.6
Ah.06g194460 Amaranthus hybridus HOM05D004118 ORTHO05D004686 6.6e-54 216.1 629 34.8
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 1.1e-53 215.3 725 31.0
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.5e-53 214.9 682 31.5
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 2.5e-53 214.2 628 33.6
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 3.3e-53 213.8 617 33.1
ECA240G2123 Erigeron canadensis HOM05D004118 ORTHO05D004686 4.3e-53 213.4 627 33.3
Peaxi162Scf00000g00285 Petunia axillaris HOM05D004118 ORTHO05D004686 4.3e-53 213.4 662 33.5
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 7.3e-53 212.6 572 34.1
Rhsim06G0203400 Rhododendron simsii HOM05D004118 ORTHO05D004686 2.1e-52 211.1 693 33.0
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 2.8e-52 210.7 691 32.1
unitig_37.g12565 Utricularia gibba HOM05D004118 ORTHO05D004686 4.7e-52 209.9 569 35.0
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 2.3e-51 207.6 588 35.2
ECA234G1224 Erigeron canadensis HOM05D004118 ORTHO05D004686 4.0e-51 206.8 646 33.7
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 6.8e-51 206.1 535 33.3
arahy.Tifrunner.gnm1.ann1.82B0EJ Arachis hypogaea HOM05D004118 ORTHO05D004686 1.5e-50 204.9 483 39.1
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 2.6e-50 204.1 655 32.7
Oeu019296.1 Olea europaea HOM05D004118 ORTHO05D004686 2.6e-50 204.1 688 31.7
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 5.8e-50 203.0 590 31.9
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 3.7e-49 200.3 690 31.2
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 6.4e-49 199.5 720 30.1
Lalb_Chr19g0134031 Lupinus albus HOM05D004118 ORTHO05D004686 8.3e-49 199.1 559 34.2
MSTRG.15246 Avicennia marina HOM05D004118 ORTHO05D004686 1.1e-48 198.7 699 32.6
vmacro11898 Vaccinium macrocarpon HOM05D004118 ORTHO05D004686 1.9e-48 198.0 671 31.9
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 4.6e-47 193.4 702 29.9
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 6.0e-47 193.0 722 29.5
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 2.3e-46 191.0 690 31.2
Hma1.2p1_0313F.1_g121640 Hydrangea macrophylla HOM05D004118 ORTHO05D004686 1.5e-45 188.3 611 34.2
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 4.3e-45 186.8 524 34.2
EL10Ac4g08266 Beta vulgaris HOM05D004118 ORTHO05D004686 5.6e-45 186.4 721 29.4
SGA_v2.0_scaffold70G23697 Striga asiatica HOM05D004118 ORTHO05D004686 6.2e-44 183.0 600 34.3
Gorai.004G029800 Gossypium raimondii HOM05D004118 ORTHO05D004686 2.3e-43 181.0 527 33.4
Gohir.D08G032400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 3.1e-43 180.6 527 33.6
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 4.0e-43 180.3 748 27.7
Lalb_Chr03g0030811 Lupinus albus HOM05D004118 ORTHO05D004686 2.2e-41 174.5 544 33.3
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 3.7e-41 173.7 684 32.6
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.9e-40 171.4 443 34.3
unitig_747.g21581 Utricularia gibba HOM05D004118 ORTHO05D004686 1.3e-38 165.2 728 27.9
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 8.6e-38 162.5 715 29.5
SGA_v2.0_scaffold130G34343 Striga asiatica HOM05D004118 ORTHO05D004686 6.2e-36 156.4 572 33.6
AUR62036141 Chenopodium quinoa HOM05D004118 ORTHO05D004686 2.3e-35 154.5 698 28.2
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 6.4e-33 146.4 301 39.5
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 6.4e-33 146.4 704 28.0
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 3.2e-32 144.1 681 28.2
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 9.2e-32 142.5 661 28.9
GSVIVG01014262001 Vitis vinifera HOM05D004118 ORTHO05D003395 3.0e-30 137.5 420 36.0
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 8.6e-30 136.0 159 51.6
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 2.5e-29 134.4 608 30.1
Nn1g06377 Nelumbo nucifera HOM05D004118 ORTHO05D004686 1.1e-27 129.0 280 36.1
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 2.6e-26 124.4 598 25.9
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 5.8e-26 123.2 236 39.4
HPP92_003871 Vanilla planifolia HOM05D004118 ORTHO05D004686 4.9e-25 120.2 689 26.1
HanXRQChr12g0372791 Helianthus annuus HOM05D004118 ORTHO05D004686 4.2e-24 117.1 197 49.7
CAN.G329.5 Capsicum annuum HOM05D004118 ORTHO05D004686 1.0e-22 112.5 221 38.5
Cc04_g12070 Coffea canephora HOM05D004118 ORTHO05D004686 1.1e-19 102.4 139 45.3
HPP92_002942 Vanilla planifolia HOM05D004118 ORTHO05D004686 3.4e-18 97.4 702 25.8
Solyc12g014040.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 7.6e-18 96.3 198 36.9
Zm00001eb395950 Zea mays HOM05D004118 ORTHO05D004686 9.9e-18 95.9 783 24.3
AUR62019494 Chenopodium quinoa HOM05D004118 ORTHO05D004686 1.7e-17 95.1 172 41.3
Zm00001eb014970 Zea mays HOM05D004118 ORTHO05D004686 1.7e-17 95.1 787 25.4
Atru.chr2.2380 Acer truncatum HOM05D004118 ORTHO05D004686 2.2e-17 94.7 219 36.1
HPP92_003896 Vanilla planifolia HOM05D004118 ORTHO05D004686 4.2e-16 90.5 201 37.8
Os06g0352900 Oryza sativa ssp. japonica HOM05D004118 ORTHO05D004686 2.7e-15 87.8 797 24.6
PSO675G3813 Papaver somniferum HOM05D004118 ORTHO05D004686 4.6e-15 87.0 168 39.3
CDE10G0292 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 3.0e-14 84.3 512 26.8
Lsat_1_v5_gn_4_172920 Lactuca sativa HOM05D004118 ORTHO05D004686 1.9e-13 81.6 182 35.7
Cfa006262 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.8e-12 77.8 99 41.4
HPP92_003895 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.1e-11 75.9 397 26.4
TPR.G17527 Trifolium pratense HOM05D004118 ORTHO05D004686 1.2e-10 72.4 50 72.0
CDE10G0599 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 2.9e-09 67.8 211 30.3
Lsat_1_v5_gn_1_36460 Lactuca sativa HOM05D004118 ORTHO05D004686 7.1e-08 63.2 130 36.9
SEGI_02629 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 9.3e-08 62.8 520 24.4
CDE02G0061 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 2.7e-07 61.2 45 57.8
Lj1P837T15 Lonicera japonica HOM05D004118 ORTHO05D004686 1.0e-06 59.3 96 49.0


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