Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 1.4e-95 352.8 167 100.0
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 1.4e-90 336.3 167 93.4
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 4.0e-90 334.7 167 92.8
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 6.8e-90 334.0 167 92.8
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 8.9e-90 333.6 167 92.2
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 8.9e-90 333.6 167 92.2
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 7.5e-89 330.5 167 92.2
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 7.5e-89 330.5 167 92.2
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 2.2e-88 328.9 167 91.6
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 6.4e-88 327.4 167 90.4
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 8.3e-88 327.0 167 91.0
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 1.1e-87 326.6 171 88.9
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 5.4e-87 324.3 165 89.7
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 4.6e-86 321.2 165 89.1
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 1.2e-83 313.2 164 86.6
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 3.8e-80 301.6 166 83.7
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 5.1e-77 291.2 165 77.0
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 5.1e-77 291.2 165 82.4
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 7.1e-47 191.0 146 65.1
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 3.2e-31 139.0 165 44.2
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 3.2e-31 139.0 167 45.5
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 5.5e-31 138.3 136 49.3
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 5.5e-31 138.3 157 44.6
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 7.2e-31 137.9 166 44.6
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 7.2e-31 137.9 167 44.9
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 9.4e-31 137.5 171 45.0
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 9.4e-31 137.5 171 45.0
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.2e-30 137.1 157 44.6
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 2.7e-30 136.0 136 48.5
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 2.7e-30 136.0 166 42.8
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 3.6e-30 135.6 136 47.8
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 6.1e-30 134.8 156 44.2
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 7.9e-30 134.4 135 48.1
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 1.4e-29 133.7 135 48.1
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 6.7e-29 131.3 135 47.4
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 3.3e-28 129.0 137 46.7
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 5.7e-28 128.3 161 42.9
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 3.1e-26 122.5 165 41.2
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 4.5e-25 118.6 161 41.6
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 2.0e-20 103.2 157 35.7
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 2.0e-20 103.2 157 35.7
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 2.6e-20 102.8 157 35.7
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 2.6e-20 102.8 157 35.7
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 2.6e-20 102.8 157 35.7
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 5.7e-20 101.7 79 63.3
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 2.8e-19 99.4 157 36.9
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 4.8e-19 98.6 157 36.3
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 8.2e-19 97.8 157 34.4
THA.LOC104810616 Tarenaya hassleriana HOM05D008154 ORTHO05D406818 8.2e-19 97.8 167 33.5
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 1.2e-17 94.0 169 33.1
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 2.0e-17 93.2 160 33.1
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 1.0e-16 90.9 161 32.3
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 1.3e-16 90.5 170 32.4
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 1.7e-16 90.1 160 31.9
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 2.2e-16 89.7 160 31.2
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 2.2e-16 89.7 161 35.4
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 2.9e-16 89.4 155 34.8
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 2.9e-16 89.4 174 31.6
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 2.9e-16 89.4 161 32.9
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 3.8e-16 89.0 161 32.9
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 6.5e-16 88.2 161 32.3
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 6.5e-16 88.2 161 32.3
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 4.2e-15 85.5 172 31.4
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 1.6e-14 83.6 160 33.8
CARHR090950 Cardamine hirsuta HOM05D008154 ORTHO05D012553 4.7e-14 82.0 48 81.2
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 3.0e-13 79.3 157 31.2
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 4.0e-13 79.0 174 29.3
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 1.3e-08 63.9 124 31.5


User provided reference genes

Program Settings