Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20807 Brassica carinata HOM05D008662 ORTHO05D010843 1.9e-83 312.4 150 100.0
BcaB04g20805 Brassica carinata HOM05D008662 ORTHO05D010843 3.3e-59 231.9 125 84.8
BcaC09g48756 Brassica carinata HOM05D008662 ORTHO05D010843 3.3e-59 231.9 125 84.8
C01p46230 Brassica napus HOM05D008662 ORTHO05D010843 3.3e-59 231.9 125 84.8
BolC1t04584H Brassica oleracea HOM05D008662 ORTHO05D010843 3.3e-59 231.9 125 84.8
BraA01t03711Z Brassica rapa HOM05D008662 ORTHO05D010843 3.3e-59 231.9 125 84.8
A01p36470 Brassica napus HOM05D008662 ORTHO05D010843 2.8e-58 228.8 125 84.0
BolC5t33569H Brassica oleracea HOM05D008662 ORTHO05D010843 9.3e-46 187.2 125 68.0
BraA05t22018Z Brassica rapa HOM05D008662 ORTHO05D010843 1.2e-45 186.8 124 68.5
Sp3g16060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 2.7e-45 185.7 125 68.8
A05p31860 Brassica napus HOM05D008662 ORTHO05D010843 6.0e-45 184.5 126 68.3
C05p48350 Brassica napus HOM05D008662 ORTHO05D010843 3.0e-44 182.2 130 66.2
BcaC05g28732 Brassica carinata HOM05D008662 ORTHO05D010843 3.9e-44 181.8 130 65.4
BcaB04g18973 Brassica carinata HOM05D008662 ORTHO05D010843 1.2e-40 170.2 138 60.1
C03p49300 Brassica napus HOM05D008662 ORTHO05D010843 1.2e-40 170.2 125 63.2
BolC3t17219H Brassica oleracea HOM05D008662 ORTHO05D010843 7.6e-40 167.5 120 64.2
BcaC01g03721 Brassica carinata HOM05D008662 ORTHO05D010843 1.7e-39 166.4 122 63.1
BcaB06g25856 Brassica carinata HOM05D008662 ORTHO05D010843 1.4e-38 163.3 118 65.3
BraA03t13204Z Brassica rapa HOM05D008662 ORTHO05D010843 3.2e-38 162.2 125 60.8
A03p40460 Brassica napus HOM05D008662 ORTHO05D010843 4.2e-38 161.8 125 60.0
Thhalv10021356m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 7.9e-37 157.5 117 61.5
AL6G37270 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 1.3e-31 140.2 125 52.0
Sp2g22060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 4.9e-31 138.3 116 58.6
AL6G37260 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 8.4e-31 137.5 117 57.3
AT5G25470 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 1.9e-30 136.3 119 56.3
BraA06t26539Z Brassica rapa HOM05D008662 ORTHO05D010843 1.2e-29 133.7 120 54.2
BcaB04g19788 Brassica carinata HOM05D008662 ORTHO05D010843 4.6e-29 131.7 132 49.2
AT5G25475 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 6.0e-29 131.3 124 48.4
BraA02t08937Z Brassica rapa HOM05D008662 ORTHO05D010843 1.0e-28 130.6 126 53.2
BcaNung02264 Brassica carinata HOM05D008662 ORTHO05D010843 1.8e-28 129.8 118 54.2
BraA09t36259Z Brassica rapa HOM05D008662 ORTHO05D010843 1.8e-28 129.8 128 50.8
BolC2t12013H Brassica oleracea HOM05D008662 ORTHO05D010843 3.0e-28 129.0 134 50.7
C07p42410 Brassica napus HOM05D008662 ORTHO05D010843 3.9e-28 128.6 118 53.4
BolC7t44768H Brassica oleracea HOM05D008662 ORTHO05D010843 3.9e-28 128.6 118 53.4
A02p39720 Brassica napus HOM05D008662 ORTHO05D010843 1.1e-27 127.1 123 50.4
C07p42350 Brassica napus HOM05D008662 ORTHO05D010843 1.9e-27 126.3 125 50.4
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.9e-27 126.3 125 50.4
CARHR000030 Cardamine hirsuta HOM05D008662 ORTHO05D010843 2.5e-27 125.9 125 49.6
Carub.0006s2333 Capsella rubella HOM05D008662 ORTHO05D010843 3.3e-27 125.6 123 49.6
C02p59500 Brassica napus HOM05D008662 ORTHO05D010843 4.3e-27 125.2 125 48.8
A06p36170 Brassica napus HOM05D008662 ORTHO05D010843 5.6e-27 124.8 124 50.0
Carub.0006s2332 Capsella rubella HOM05D008662 ORTHO05D010843 2.1e-26 122.9 119 52.1
Thhalv10004752m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 8.2e-26 120.9 118 52.5
CARHR187920 Cardamine hirsuta HOM05D008662 ORTHO05D010843 1.8e-25 119.8 127 47.2
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 9.0e-17 90.9 124 43.5
Aa31LG7G14390 Aethionema arabicum HOM05D006628 ORTHO05D000088 5.3e-09 65.1 117 29.1
Thhalv10025812m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 4.5e-08 62.0 112 32.1
Aa31LG5G11590 Aethionema arabicum HOM05D006628 ORTHO05D000088 7.7e-08 61.2 116 29.3
BcaB07g32200 Brassica carinata HOM05D008662 ORTHO05D010843 3.8e-07 58.9 52 51.9
THA.LOC104807272 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 3.8e-07 58.9 125 32.0
THA.LOC104807340 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 8.5e-07 57.8 120 31.7
Thhalv10026054m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 1.1e-06 57.4 110 30.9
A03p62870 Brassica napus HOM05D006628 ORTHO05D000088 1.9e-06 56.6 116 26.7
C07p60560 Brassica napus HOM05D006628 ORTHO05D000088 1.9e-06 56.6 116 26.7
BolC7t46487H Brassica oleracea HOM05D006628 ORTHO05D000088 1.9e-06 56.6 116 26.7
BraA03t15364Z Brassica rapa HOM05D006628 ORTHO05D000088 1.9e-06 56.6 116 26.7
C01p16350 Brassica napus HOM05D006628 ORTHO05D000088 3.2e-06 55.8 137 29.2
BcaC09g51730 Brassica carinata HOM05D006628 ORTHO05D000088 4.2e-06 55.5 135 30.4
BolC1t01586H Brassica oleracea HOM05D006628 ORTHO05D000088 4.2e-06 55.5 137 29.2
A02p24960 Brassica napus HOM05D006628 ORTHO05D000088 7.2e-06 54.7 111 31.5
BraA02t07486Z Brassica rapa HOM05D006628 ORTHO05D000088 7.2e-06 54.7 111 31.5


User provided reference genes

Program Settings