Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20805 Brassica carinata HOM05D008662 ORTHO05D010843 3.3e-138 495.0 235 100.0
BcaC09g48756 Brassica carinata HOM05D008662 ORTHO05D010843 3.3e-138 495.0 235 100.0
C01p46230 Brassica napus HOM05D008662 ORTHO05D010843 3.3e-138 495.0 235 100.0
BolC1t04584H Brassica oleracea HOM05D008662 ORTHO05D010843 3.3e-138 495.0 235 100.0
BraA01t03711Z Brassica rapa HOM05D008662 ORTHO05D010843 2.9e-134 481.9 235 97.0
A01p36470 Brassica napus HOM05D008662 ORTHO05D010843 4.1e-133 478.0 235 96.2
Sp3g16060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 9.9e-95 350.5 242 70.7
BcaC05g28732 Brassica carinata HOM05D008662 ORTHO05D010843 1.3e-86 323.6 232 67.7
C05p48350 Brassica napus HOM05D008662 ORTHO05D010843 2.9e-86 322.4 232 67.7
BolC5t33569H Brassica oleracea HOM05D008662 ORTHO05D010843 3.8e-86 322.0 231 67.5
A05p31860 Brassica napus HOM05D008662 ORTHO05D010843 9.3e-85 317.4 232 67.2
BraA05t22018Z Brassica rapa HOM05D008662 ORTHO05D010843 1.2e-84 317.0 232 66.4
BcaB04g18973 Brassica carinata HOM05D008662 ORTHO05D010843 2.7e-84 315.8 235 66.0
C03p49300 Brassica napus HOM05D008662 ORTHO05D010843 9.6e-82 307.4 245 62.4
BcaB06g25856 Brassica carinata HOM05D008662 ORTHO05D010843 1.3e-81 307.0 238 64.3
BcaC01g03721 Brassica carinata HOM05D008662 ORTHO05D010843 2.1e-81 306.2 255 60.4
BolC3t17219H Brassica oleracea HOM05D008662 ORTHO05D010843 3.7e-81 305.4 252 59.5
BraA03t13204Z Brassica rapa HOM05D008662 ORTHO05D010843 6.2e-81 304.7 247 61.9
Thhalv10021356m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 8.1e-81 304.3 237 65.0
A03p40460 Brassica napus HOM05D008662 ORTHO05D010843 1.8e-80 303.1 247 61.1
AL6G37270 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 2.2e-70 269.6 246 54.9
AT5G25470 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 9.3e-69 264.2 247 54.7
AT5G25475 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 8.7e-67 257.7 246 52.8
AL6G37260 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 4.3e-66 255.4 245 53.9
BraA06t26539Z Brassica rapa HOM05D008662 ORTHO05D010843 9.7e-66 254.2 244 54.9
Sp2g22060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 1.4e-64 250.4 240 55.0
BraA09t36259Z Brassica rapa HOM05D008662 ORTHO05D010843 1.8e-64 250.0 243 53.9
A06p36170 Brassica napus HOM05D008662 ORTHO05D010843 3.1e-64 249.2 241 54.4
BraA02t08937Z Brassica rapa HOM05D008662 ORTHO05D010843 9.0e-64 247.7 244 54.5
A02p39720 Brassica napus HOM05D008662 ORTHO05D010843 2.6e-63 246.1 246 52.8
C07p42350 Brassica napus HOM05D008662 ORTHO05D010843 2.6e-63 246.1 240 52.9
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 2.6e-63 246.1 240 52.9
Carub.0006s2332 Capsella rubella HOM05D008662 ORTHO05D010843 3.4e-63 245.7 243 52.7
Carub.0006s2333 Capsella rubella HOM05D008662 ORTHO05D010843 1.0e-62 244.2 243 51.9
C02p59500 Brassica napus HOM05D008662 ORTHO05D010843 1.1e-61 240.7 240 52.9
BolC2t12013H Brassica oleracea HOM05D008662 ORTHO05D010843 2.5e-61 239.6 245 53.9
BcaB04g20807 Brassica carinata HOM05D008662 ORTHO05D010843 2.3e-59 233.0 125 84.8
CARHR187920 Cardamine hirsuta HOM05D008662 ORTHO05D010843 5.1e-59 231.9 244 50.0
Thhalv10004752m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 5.7e-58 228.4 247 51.4
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 4.7e-44 182.2 246 43.5
CARHR000030 Cardamine hirsuta HOM05D008662 ORTHO05D010843 5.0e-30 135.6 171 46.2
BcaB07g32200 Brassica carinata HOM05D008662 ORTHO05D010843 1.1e-29 134.4 175 45.7
BcaB04g19788 Brassica carinata HOM05D008662 ORTHO05D010843 3.6e-28 129.4 133 49.6
BcaNung02264 Brassica carinata HOM05D008662 ORTHO05D010843 3.6e-28 129.4 120 54.2
C07p42410 Brassica napus HOM05D008662 ORTHO05D010843 8.0e-28 128.3 120 53.3
BolC7t44768H Brassica oleracea HOM05D008662 ORTHO05D010843 8.0e-28 128.3 120 53.3
CARHR187960 Cardamine hirsuta HOM05D008662 ORTHO05D010843 3.2e-16 89.7 61 65.6
THA.LOC104819596 Tarenaya hassleriana HOM05D007600 ORTHO05D009132 3.3e-13 79.7 121 37.2
Aa31LG7G14390 Aethionema arabicum HOM05D006628 ORTHO05D000088 1.2e-12 77.8 217 24.0
THA.LOC104807272 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 2.1e-12 77.0 261 24.5
THA.LOC104807340 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 4.0e-11 72.8 256 25.8
AL6G29290 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 2.6e-10 70.1 86 39.5
Aa31LG5G11590 Aethionema arabicum HOM05D006628 ORTHO05D000088 9.8e-10 68.2 216 23.1
Carub.0003s2950 Capsella rubella HOM05D007600 ORTHO05D009132 1.7e-09 67.4 136 29.4
AT5G18000 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 2.9e-09 66.6 86 37.2
Carub.0006s1638 Capsella rubella HOM05D007600 ORTHO05D009132 2.9e-09 66.6 128 32.0
Thhalv10023054m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 4.9e-09 65.9 85 37.6
BcaB04g18919 Brassica carinata HOM05D007600 ORTHO05D009132 6.4e-09 65.5 86 33.7
Sp6g26290 Schrenkiella parvula HOM05D007600 ORTHO05D009132 1.1e-08 64.7 86 34.9
AL457U10020 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.4e-08 64.3 90 35.6
AT5G18090 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 1.4e-08 64.3 86 37.2
Thhalv10015705m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 1.4e-08 64.3 86 33.7
BcaB05g23317 Brassica carinata HOM05D007600 ORTHO05D009132 1.9e-08 63.9 128 29.7
Thhalv10025812m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 1.9e-08 63.9 110 31.8
AL6G29100 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 2.4e-08 63.5 86 36.0
BcaB04g18922 Brassica carinata HOM05D007600 ORTHO05D009132 2.4e-08 63.5 88 30.7
Eucgr.I01213 Eucalyptus grandis HOM05D008110 ORTHO05D000088 2.4e-08 63.5 251 23.9
Sopen01g051130 Solanum pennellii HOM05D000823 ORTHO05D000088 2.4e-08 63.5 224 25.9
BcaC03g13563 Brassica carinata HOM05D007600 ORTHO05D009132 3.2e-08 63.2 128 29.7
C02p09570 Brassica napus HOM05D007600 ORTHO05D009132 3.2e-08 63.2 128 29.7
BraA10t44204Z Brassica rapa HOM05D007600 ORTHO05D009132 3.2e-08 63.2 86 36.0
Sp3g15230 Schrenkiella parvula HOM05D007600 ORTHO05D009132 3.2e-08 63.2 100 32.0
Sp6g26220 Schrenkiella parvula HOM05D007600 ORTHO05D009132 3.2e-08 63.2 86 34.9
BcaB08g36708 Brassica carinata HOM05D007600 ORTHO05D009132 4.1e-08 62.8 80 36.2
A05p32720 Brassica napus HOM05D007600 ORTHO05D009132 4.1e-08 62.8 100 31.0
BolC2t06864H Brassica oleracea HOM05D007600 ORTHO05D009132 4.1e-08 62.8 128 28.9
BraA05t22094Z Brassica rapa HOM05D007600 ORTHO05D009132 4.1e-08 62.8 100 31.0
Thhalv10026054m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 4.1e-08 62.8 244 22.5
C07p60560 Brassica napus HOM05D006628 ORTHO05D000088 5.4e-08 62.4 118 28.8
C09p58890 Brassica napus HOM05D007600 ORTHO05D009132 5.4e-08 62.4 87 35.6
BolC7t46487H Brassica oleracea HOM05D006628 ORTHO05D000088 5.4e-08 62.4 118 28.8
Carub.0006s1619 Capsella rubella HOM05D007600 ORTHO05D009132 5.4e-08 62.4 121 30.6
Thhalv10015617m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 5.4e-08 62.4 86 31.4
AL6G20180 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 7.0e-08 62.0 89 36.0
BcaB06g25789 Brassica carinata HOM05D007600 ORTHO05D009132 7.0e-08 62.0 88 31.8
BcaC01g03795 Brassica carinata HOM05D007600 ORTHO05D009132 7.0e-08 62.0 88 31.8
A03p40020 Brassica napus HOM05D007600 ORTHO05D009132 7.0e-08 62.0 88 31.8
C03p48550 Brassica napus HOM05D007600 ORTHO05D009132 7.0e-08 62.0 110 29.1
BolC3t17133H Brassica oleracea HOM05D007600 ORTHO05D009132 7.0e-08 62.0 88 31.8
BraA02t05424Z Brassica rapa HOM05D007600 ORTHO05D009132 7.0e-08 62.0 86 31.4
BraA03t13150Z Brassica rapa HOM05D007600 ORTHO05D009132 7.0e-08 62.0 88 31.8
CARHR291980 Cardamine hirsuta HOM05D007600 ORTHO05D009132 7.0e-08 62.0 90 30.0
Cc02_g18270 Coffea canephora HOM05D000823 ORTHO05D000088 9.2e-08 61.6 238 25.6
BcaC03g16172 Brassica carinata HOM05D006628 ORTHO05D000088 1.2e-07 61.2 111 32.4
A02p04630 Brassica napus HOM05D007600 ORTHO05D009132 1.2e-07 61.2 86 31.4
A02p24960 Brassica napus HOM05D006628 ORTHO05D000088 1.2e-07 61.2 111 32.4
C02p39080 Brassica napus HOM05D006628 ORTHO05D000088 1.2e-07 61.2 111 32.4
BolC2t09918H Brassica oleracea HOM05D006628 ORTHO05D000088 1.2e-07 61.2 111 32.4
BraA02t07486Z Brassica rapa HOM05D006628 ORTHO05D000088 1.2e-07 61.2 111 32.4
BcaB06g25793 Brassica carinata HOM05D007600 ORTHO05D009132 1.6e-07 60.8 100 29.0
A10p21410 Brassica napus HOM05D007600 ORTHO05D009132 1.6e-07 60.8 81 35.8
A03p40010 Brassica napus HOM05D007600 ORTHO05D009132 2.0e-07 60.5 164 28.7
BraA04t18175Z Brassica rapa HOM05D007600 ORTHO05D009132 2.0e-07 60.5 90 32.2
BcaB06g25788 Brassica carinata HOM05D007600 ORTHO05D009132 2.7e-07 60.1 127 29.1
Solyc01g108930.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 2.7e-07 60.1 235 25.1
A03p62870 Brassica napus HOM05D006628 ORTHO05D000088 3.5e-07 59.7 118 28.0
C04p64110 Brassica napus HOM05D007600 ORTHO05D009132 3.5e-07 59.7 87 31.0
BolC4t27889H Brassica oleracea HOM05D007600 ORTHO05D009132 3.5e-07 59.7 90 32.2
BraA03t13149Z Brassica rapa HOM05D007600 ORTHO05D009132 3.5e-07 59.7 127 29.1
BraA03t15364Z Brassica rapa HOM05D006628 ORTHO05D000088 3.5e-07 59.7 118 28.0
BcaC01g03796 Brassica carinata HOM05D007600 ORTHO05D009132 4.6e-07 59.3 127 28.3
A04p26690 Brassica napus HOM05D007600 ORTHO05D009132 4.6e-07 59.3 87 32.2
C03p48540 Brassica napus HOM05D007600 ORTHO05D009132 4.6e-07 59.3 127 28.3
BolC3t17132H Brassica oleracea HOM05D007600 ORTHO05D009132 4.6e-07 59.3 127 28.3
BolC5t33688H Brassica oleracea HOM05D007600 ORTHO05D009132 4.6e-07 59.3 100 31.0
AT5G09780 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 6.0e-07 58.9 66 40.9
CARHR195070 Cardamine hirsuta HOM05D007600 ORTHO05D009132 6.0e-07 58.9 86 31.4
BcaC04g18726 Brassica carinata HOM05D007600 ORTHO05D009132 7.8e-07 58.5 88 36.4
BolC9t58734H Brassica oleracea HOM05D007600 ORTHO05D009132 7.8e-07 58.5 88 36.4
Thhalv10022138m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 1.0e-06 58.2 90 27.8
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.0e-06 58.2 232 24.6
BcaB05g23662 Brassica carinata HOM05D006628 ORTHO05D000088 1.3e-06 57.8 120 29.2
C01p16350 Brassica napus HOM05D006628 ORTHO05D000088 1.3e-06 57.8 122 28.7
BolC1t01586H Brassica oleracea HOM05D006628 ORTHO05D000088 1.7e-06 57.4 122 28.7
Aa31LG11G11510 Aethionema arabicum HOM05D007600 ORTHO05D009132 2.3e-06 57.0 87 28.7
BcaC02g07741 Brassica carinata HOM05D007600 ORTHO05D009132 2.3e-06 57.0 91 30.8
C05p49420 Brassica napus HOM05D007600 ORTHO05D009132 3.9e-06 56.2 100 30.0
Thhalv10028696m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 5.0e-06 55.8 119 27.7
Sp6g02680 Schrenkiella parvula HOM05D006628 ORTHO05D000088 5.0e-06 55.8 108 27.8
TPR.G10231 Trifolium pratense HOM05D000823 ORTHO05D000088 6.6e-06 55.5 110 29.1
BcaC05g28837 Brassica carinata HOM05D007600 ORTHO05D009132 8.6e-06 55.1 86 31.4
BcaC09g51730 Brassica carinata HOM05D006628 ORTHO05D000088 8.6e-06 55.1 179 24.0


User provided reference genes

Program Settings