Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-119 432.6 211 100.0
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 3.7e-109 398.3 247 82.2
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 2.4e-108 395.6 247 82.2
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 6.2e-96 354.4 242 79.3
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 7.8e-75 284.3 245 61.2
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 7.1e-68 261.2 204 65.7
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 7.1e-68 261.2 204 65.7
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 7.1e-68 261.2 204 65.7
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 1.1e-65 253.8 208 63.5
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 4.2e-60 235.3 188 64.4
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 4.8e-56 221.9 178 64.0
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 9.3e-52 207.6 245 46.9
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 2.1e-51 206.5 244 45.9
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-48 195.7 211 50.2
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 6.2e-48 194.9 244 44.3
BcaC05g29164 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-40 170.2 218 48.6
BolC2t11013H Brassica oleracea HOM05D007568 ORTHO05D009779 1.1e-36 157.5 134 62.7
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 3.2e-36 156.0 247 36.8
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 3.0e-34 149.4 247 36.0
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 9.7e-33 144.4 220 38.6
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 3.4e-30 136.0 175 46.3
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 4.2e-28 129.0 237 32.1
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 5.5e-28 128.6 233 34.3
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-27 127.1 244 32.4
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 4.7e-27 125.6 225 32.9
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 7.9e-27 124.8 225 31.6
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-26 122.9 166 41.6
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 3.9e-26 122.5 229 31.4
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 3.9e-26 122.5 225 31.6
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 3.9e-26 122.5 229 31.4
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 6.7e-26 121.7 225 31.1
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.0e-25 120.2 238 34.5
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 1.3e-24 117.5 158 40.5
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 4.8e-24 115.5 250 32.4
A05p24570 Brassica napus HOM05D007568 ORTHO05D009779 6.3e-24 115.2 204 40.7
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-23 114.0 140 41.4
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 3.1e-23 112.8 67 76.1
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-21 107.1 217 32.3
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 2.9e-21 106.3 238 30.3
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-20 103.2 201 32.3
BcaB03g12898 Brassica carinata HOM05D007568 ORTHO05D009779 4.2e-20 102.4 88 63.6
BcaB06g25662 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-20 102.4 88 63.6
BcaB08g37312 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-19 100.5 87 63.2
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 2.3e-18 96.7 127 42.5
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 3.0e-18 96.3 111 45.9
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 4.0e-18 95.9 104 43.3
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 1.3e-16 90.9 171 35.7
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 1.7e-16 90.5 171 36.8
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-16 89.0 166 35.5
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-15 87.4 171 36.3
C05p33930 Brassica napus HOM05D030822 ORTHO05D099489 2.4e-15 86.7 135 41.5
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 4.1e-15 85.9 133 38.3
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 4.1e-15 85.9 133 38.3
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 9.1e-15 84.7 133 39.1
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-14 84.0 98 44.9
AL8G20230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.7e-13 80.5 202 24.8
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 1.6e-11 73.9 108 31.5
C03p67580 Brassica napus HOM05D007568 ORTHO05D009779 2.1e-11 73.6 55 61.8
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 2.1e-11 73.6 77 46.8
AL7G48330 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-11 72.4 138 27.5
AL8G20930 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-11 72.4 135 27.4
BolC5t34086H Brassica oleracea HOM05D007568 ORTHO05D009779 4.7e-11 72.4 46 76.1
AL1031U10010 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 138 27.5
AL1G44420 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL1G55590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL27U10060 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL2G23190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 138 27.5
AL3G39070 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL7G15190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL7G49540 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL8G18830 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL8G23600 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL9U11530 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.1e-11 72.0 135 27.4
AL1G50690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL1G59740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL2G16090 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL2G22580 Arabidopsis lyrata HOM05D000022 ORTHO05D010269 8.0e-11 71.6 138 27.5
AL3G51030 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL4G20730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL5G12670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL5G19810 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL5G29730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL6G34510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL6G41960 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL7G11680 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 71.6 135 27.4
AL2G18690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.0e-10 71.2 196 24.0
AL8G18160 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.4e-10 70.9 138 26.8
AL1G50240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.8e-10 70.5 135 27.4
AL2G25150 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.0e-10 69.7 138 26.8
AL8G17260 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.0e-10 69.7 135 26.7
AL3G41740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-10 69.3 137 27.0
AL1G51750 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-10 68.9 135 26.7
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 5.2e-10 68.9 99 39.4
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.8e-10 68.6 180 23.3
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.8e-10 68.6 180 23.3
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.5e-09 67.4 180 23.3
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-09 67.4 168 27.4
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 1.5e-09 67.4 168 27.4
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-09 67.0 180 23.3
AL5G17290 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-09 67.0 129 26.4
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 2.0e-09 67.0 88 36.4
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-09 65.9 155 30.3
AL6G43510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.7e-09 65.5 127 27.6
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 7.5e-09 65.1 62 56.5
AL9U11490 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.3e-08 64.3 180 22.8
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-08 64.3 77 42.9
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.7e-08 63.9 230 28.3
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 2.2e-08 63.5 73 39.7
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.8e-08 63.2 228 27.2
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 2.8e-08 63.2 107 31.8
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.7e-08 62.8 218 27.5
C04p17840 Brassica napus HOM05D007568 ORTHO05D014500 4.8e-08 62.4 114 37.7
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 4.8e-08 62.4 85 38.8
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 4.8e-08 62.4 169 32.5
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.8e-08 62.4 126 26.2
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 8.3e-08 61.6 103 35.0
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 8.3e-08 61.6 239 25.1
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 1.4e-07 60.8 91 40.7
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 2.4e-07 60.1 208 26.0
BcaC04g21303 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-07 59.7 207 26.1
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.1e-07 59.3 127 27.6
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.1e-07 59.3 127 27.6
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.1e-07 59.3 127 27.6
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.1e-07 59.3 127 27.6
BraA02t07226Z Brassica rapa HOM05D000353 ORTHO05D000174 5.4e-07 58.9 169 24.3
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.4e-07 58.9 125 25.6
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 5.4e-07 58.9 236 26.3
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-06 57.8 127 27.6
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.2e-06 57.8 210 27.6
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.6e-06 57.4 210 27.6
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.6e-06 57.4 210 27.6
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.7e-06 55.1 125 24.8


User provided reference genes

Program Settings