Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20778 Brassica carinata HOM05D011073 ORTHO05D013800 1.1e-89 333.6 205 100.0
A05p19800 Brassica napus HOM05D011073 ORTHO05D013800 5.1e-47 191.8 206 64.1
C03p77490 Brassica napus HOM05D011073 ORTHO05D013800 1.9e-41 173.3 115 95.7
C03p10570 Brassica napus HOM05D011073 ORTHO05D013800 2.5e-41 172.9 206 58.3
BraA05t20886Z Brassica rapa HOM05D003089 ORTHO05D001766 6.1e-40 168.3 165 66.1
BcaC04g22717 Brassica carinata HOM05D011073 ORTHO05D013800 1.0e-34 151.0 189 63.5
BraA02t06724Z Brassica rapa HOM05D011073 ORTHO05D013800 8.5e-34 147.9 108 91.7
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.2e-32 144.1 171 60.8
BolC9t54509H Brassica oleracea HOM05D011073 ORTHO05D013800 2.0e-30 136.7 133 76.7
BolC4t22963H Brassica oleracea HOM05D011073 ORTHO05D013800 2.2e-29 133.3 73 100.0
A06p37820 Brassica napus HOM05D011073 ORTHO05D013800 2.7e-27 126.3 80 90.0
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 2.0e-19 100.1 166 50.6
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 2.9e-18 96.3 179 46.9
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 4.2e-17 92.4 174 52.9
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 8.0e-16 88.2 172 50.6
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 9.8e-14 81.3 81 69.1
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.7e-13 80.5 170 48.8
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.1e-12 77.8 175 44.0
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 7.0e-12 75.1 58 79.3
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 7.0e-12 75.1 58 79.3
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 9.2e-12 74.7 184 45.7
BcaB05g24123 Brassica carinata HOM05D003795 ORTHO05D004308 2.0e-11 73.6 162 39.5
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 2.7e-11 73.2 173 43.9
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 4.5e-11 72.4 81 65.4
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.7e-10 70.5 170 46.5
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.9e-09 67.0 172 40.1
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 5.6e-09 65.5 103 48.5
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 1.6e-08 63.9 176 36.9
AUR62010625 Chenopodium quinoa HOM05D003795 ORTHO05D004308 6.1e-08 62.0 91 52.7
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 8.0e-08 61.6 168 41.1
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 8.0e-08 61.6 178 40.4
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.4e-07 60.8 172 43.6
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 1.8e-07 60.5 171 35.7
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 5.2e-07 58.9 167 37.7
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 6.8e-07 58.5 92 48.9
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 8.9e-07 58.2 66 59.1
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 1.2e-06 57.8 181 39.8
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 1.5e-06 57.4 169 39.6
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.6e-06 56.6 58 63.8
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 2.6e-06 56.6 192 35.9
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 2.6e-06 56.6 201 37.3
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 7.5e-06 55.1 178 38.8


User provided reference genes

Program Settings