Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20587 Brassica carinata HOM05D001456 ORTHO05D015898 2.8e-76 288.5 144 100.0
C01p42700 Brassica napus HOM05D001456 ORTHO05D015898 5.4e-59 231.1 138 78.3
BcaC09g49085 Brassica carinata HOM05D001456 ORTHO05D015898 9.2e-59 230.3 138 78.3
BolC1t04225H Brassica oleracea HOM05D001456 ORTHO05D015898 9.2e-59 230.3 138 78.3
A01p33420 Brassica napus HOM05D001456 ORTHO05D015898 4.5e-58 228.0 139 79.1
A01p33400 Brassica napus HOM05D001456 ORTHO05D015898 1.0e-57 226.9 139 79.1
BraA01t03463Z Brassica rapa HOM05D001456 ORTHO05D015898 8.6e-57 223.8 139 78.4
AL5G35040 Arabidopsis lyrata HOM05D001456 ORTHO05D015898 3.0e-17 92.4 124 39.5
Thhalv10022152m.g Eutrema salsugineum HOM05D001456 ORTHO05D015898 1.4e-14 83.6 132 40.2
AL5G30030 Arabidopsis lyrata HOM05D001456 ORTHO05D015898 2.3e-09 66.2 128 37.5
CARHR167410 Cardamine hirsuta HOM05D022556 ORTHO05D021598 1.6e-07 60.1 63 44.4
THA.LOC104801327 Tarenaya hassleriana HOM05D001456 ORTHO05D002799 6.2e-07 58.2 119 30.3
PGSC0003DMG400001457 Solanum tuberosum HOM05D001456 ORTHO05D002799 8.1e-07 57.8 146 30.8
Ah.14g086290 Amaranthus hybridus HOM05D001456 ORTHO05D002799 1.8e-06 56.6 140 30.0
Solyc02g088850.3 Solanum lycopersicum HOM05D001456 ORTHO05D002799 1.8e-06 56.6 139 29.5
CARHR159270 Cardamine hirsuta HOM05D001456 ORTHO05D021598 2.4e-06 56.2 61 42.6
SGA_v2.0_scaffold80G25683 Striga asiatica HOM05D001456 ORTHO05D002799 3.1e-06 55.8 138 27.5
Eucgr.K00579 Eucalyptus grandis HOM05D001456 ORTHO05D002799 4.0e-06 55.5 138 28.3
GSVIVG01028213001 Vitis vinifera HOM05D001456 ORTHO05D002799 4.0e-06 55.5 138 29.0
PSO170G0651 Papaver somniferum HOM05D001456 ORTHO05D002799 5.3e-06 55.1 138 27.5
TWI59G0324 Tripterygium wilfordii HOM05D001456 ORTHO05D002799 5.3e-06 55.1 138 27.5
Gohir.A11G103800 Gossypium hirsutum HOM05D001456 ORTHO05D002799 6.9e-06 54.7 139 29.5
PGR031G3055 Punica granatum HOM05D001456 ORTHO05D002799 6.9e-06 54.7 138 27.5
SEGI_20611 Sequoiadendron giganteum HOM05D001456 ORTHO05D004886 6.9e-06 54.7 139 29.5
Gohir.A12G120700 Gossypium hirsutum HOM05D001456 ORTHO05D002799 9.0e-06 54.3 138 27.5
Gohir.D12G124500 Gossypium hirsutum HOM05D001456 ORTHO05D002799 9.0e-06 54.3 138 27.5
Gorai.008G135500 Gossypium raimondii HOM05D001456 ORTHO05D002799 9.0e-06 54.3 138 27.5
Sed0008463 Sechium edule HOM05D001456 ORTHO05D002799 9.0e-06 54.3 139 29.5
Sopen02g033560 Solanum pennellii HOM05D001456 ORTHO05D002799 9.0e-06 54.3 139 28.8
TWI23G1113 Tripterygium wilfordii HOM05D001456 ORTHO05D002799 9.0e-06 54.3 138 28.3


User provided reference genes

Program Settings