Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20576 Brassica carinata HOM05D010757 ORTHO05D009635 3.9e-57 224.6 113 100.0
C01p42560 Brassica napus HOM05D010757 ORTHO05D009635 3.6e-50 201.4 118 90.7
BolC1t04209H Brassica oleracea HOM05D010757 ORTHO05D009635 3.6e-50 201.4 118 90.7
BraA01t03447Z Brassica rapa HOM05D010757 ORTHO05D009635 1.0e-49 199.9 118 89.8
BraA01t03448Z Brassica rapa HOM05D010757 ORTHO05D009635 1.0e-49 199.9 118 89.8
A01p33300 Brassica napus HOM05D010757 ORTHO05D009635 3.3e-48 194.9 118 88.1
BcaC09g49099 Brassica carinata HOM05D010757 ORTHO05D009635 6.1e-42 174.1 101 91.1
Sp3g19690 Schrenkiella parvula HOM05D010757 ORTHO05D009635 1.0e-36 156.8 119 71.4
C03p51830 Brassica napus HOM05D010757 ORTHO05D009635 6.5e-36 154.1 118 69.5
AT3G21680 Arabidopsis thaliana HOM05D010757 ORTHO05D009635 8.5e-36 153.7 120 74.2
Thhalv10022045m.g Eutrema salsugineum HOM05D010757 ORTHO05D009635 1.5e-35 152.9 120 72.5
AL3G35800 Arabidopsis lyrata HOM05D010757 ORTHO05D009635 2.5e-35 152.1 120 70.8
CARHR097620 Cardamine hirsuta HOM05D010757 ORTHO05D009635 1.6e-34 149.4 123 68.3
Carub.0003s2173 Capsella rubella HOM05D010757 ORTHO05D009635 6.8e-33 144.1 117 69.2
BcaC01g03493 Brassica carinata HOM05D010757 ORTHO05D009635 5.7e-24 114.4 86 70.9
BcaB04g19178 Brassica carinata HOM05D010757 ORTHO05D009635 3.7e-23 111.7 133 55.6
Sp7g13570 Schrenkiella parvula HOM05D010757 ORTHO05D009635 4.6e-21 104.8 117 54.7
Thhalv10026860m.g Eutrema salsugineum HOM05D010757 ORTHO05D009635 4.7e-18 94.7 120 51.7
A03p42380 Brassica napus HOM05D010757 ORTHO05D009635 1.9e-14 82.8 71 63.4
BraA03t13390Z Brassica rapa HOM05D010757 ORTHO05D009635 1.9e-14 82.8 71 63.4
MD09G1108700 Malus domestica HOM05D008160 ORTHO05D009635 5.2e-09 64.7 146 34.9
QL06p012138 Quercus lobata HOM05D008160 ORTHO05D009635 2.2e-07 59.3 89 42.7
QL08p033125 Quercus lobata HOM05D008160 ORTHO05D009635 2.2e-07 59.3 89 42.7
Nn1g03539 Nelumbo nucifera HOM05D008160 ORTHO05D009635 6.4e-07 57.8 134 31.3
Dinv05432 Davidia involucrata HOM05D008160 ORTHO05D009635 2.4e-06 55.8 84 39.3
Haze_12867 Corylus avellana HOM05D008160 ORTHO05D009635 5.4e-06 54.7 89 42.7


User provided reference genes

Program Settings