Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20482 Brassica carinata HOM05D009514 ORTHO05D011701 5.6e-161 570.9 284 100.0
BraA01t03340Z Brassica rapa HOM05D009514 ORTHO05D011701 2.6e-113 412.5 287 76.7
A01p32150 Brassica napus HOM05D009514 ORTHO05D011701 1.7e-112 409.8 287 76.7
C01p41170 Brassica napus HOM05D009514 ORTHO05D011701 2.1e-99 366.3 267 74.2
BolC1t04071H Brassica oleracea HOM05D009514 ORTHO05D011701 2.1e-99 366.3 267 74.2
BcaC09g49231 Brassica carinata HOM05D009514 ORTHO05D011701 1.1e-95 354.0 261 73.9
A05p25740 Brassica napus HOM05D009514 ORTHO05D011701 4.9e-64 248.8 293 50.2
BraA05t21459Z Brassica rapa HOM05D009514 ORTHO05D011701 1.6e-62 243.8 293 49.1
C03p62320 Brassica napus HOM05D009514 ORTHO05D011701 7.8e-62 241.5 288 51.0
BcaC01g02655 Brassica carinata HOM05D009514 ORTHO05D011701 1.3e-61 240.7 288 50.7
BolC3t18494H Brassica oleracea HOM05D009514 ORTHO05D011701 1.3e-61 240.7 288 50.7
BcaB05g21878 Brassica carinata HOM05D009514 ORTHO05D011701 2.3e-61 240.0 289 50.5
BcaB06g26413 Brassica carinata HOM05D009514 ORTHO05D011701 5.1e-61 238.8 285 49.8
A06p30640 Brassica napus HOM05D009514 ORTHO05D011701 1.5e-60 237.3 291 49.8
A06p30660 Brassica napus HOM05D009514 ORTHO05D011701 1.5e-60 237.3 291 49.8
A06p30690 Brassica napus HOM05D009514 ORTHO05D011701 1.5e-60 237.3 291 49.8
BraA06t26014Z Brassica rapa HOM05D009514 ORTHO05D011701 1.5e-60 237.3 291 49.8
BcaC05g28000 Brassica carinata HOM05D009514 ORTHO05D011701 1.4e-50 204.1 288 43.8
BcaB06g26416 Brassica carinata HOM05D009514 ORTHO05D011701 1.6e-46 190.7 282 44.3
C05p40100 Brassica napus HOM05D009514 ORTHO05D011701 1.3e-45 187.6 288 42.0
BolC5t32754H Brassica oleracea HOM05D009514 ORTHO05D011701 1.3e-45 187.6 288 42.0
Thhalv10021946m.g Eutrema salsugineum HOM05D009514 ORTHO05D011701 1.1e-36 157.9 311 38.3
AT3G22961 Arabidopsis thaliana HOM05D009514 ORTHO05D011701 2.7e-30 136.7 222 42.8
CARHR156370 Cardamine hirsuta HOM05D009514 ORTHO05D011701 1.6e-27 127.5 295 34.6
Carub.0003s2311 Capsella rubella HOM05D009514 ORTHO05D011701 6.3e-27 125.6 179 42.5
BcaB05g21874 Brassica carinata HOM05D009514 ORTHO05D011701 1.8e-26 124.0 151 49.0
AL3G37360 Arabidopsis lyrata HOM05D009514 ORTHO05D011701 3.1e-26 123.2 191 40.3
A06p30720 Brassica napus HOM05D009514 ORTHO05D011701 2.6e-25 120.2 133 53.4
BcaB05g21875 Brassica carinata HOM05D009514 ORTHO05D011701 4.3e-20 102.8 129 49.6
AL3G39210 Arabidopsis lyrata HOM05D018383 ORTHO05D019711 1.3e-08 64.7 165 28.5
AT3G24093 Arabidopsis thaliana HOM05D018383 ORTHO05D019711 1.2e-06 58.2 174 29.3
BcaB01g03096 Brassica carinata HOM05D009514 ORTHO05D094594 6.1e-06 55.8 73 43.8


User provided reference genes

Program Settings