Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 2.0e-65 252.3 131 100.0
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-42 176.8 128 75.8
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-42 176.8 128 75.8
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 1.1e-42 176.8 128 75.8
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 1.1e-42 176.8 128 75.8
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 1.1e-42 176.8 128 75.8
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 3.5e-41 171.8 128 73.4
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 4.6e-41 171.4 128 74.2
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 3.0e-40 168.7 128 71.1
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 3.0e-40 168.7 128 72.7
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 8.7e-40 167.2 128 71.1
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 2.5e-39 165.6 128 71.1
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 1.1e-34 150.2 128 62.5
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 3.5e-33 145.2 103 68.9
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 4.6e-33 144.8 128 60.2
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 4.6e-33 144.8 128 60.2
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 6.0e-33 144.4 108 66.7
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 1.3e-32 143.3 103 68.0
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 2.3e-32 142.5 103 67.0
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 3.9e-32 141.7 128 58.6
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 1.1e-31 140.2 104 66.3
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 1.5e-31 139.8 128 58.6
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 3.3e-31 138.7 103 65.0
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 4.3e-31 138.3 103 65.0
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 4.3e-31 138.3 103 66.0
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 5.6e-31 137.9 108 64.8
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 7.4e-31 137.5 108 62.0
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 7.4e-31 137.5 108 62.0
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 9.6e-31 137.1 128 55.5
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 1.3e-30 136.7 103 64.1
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 2.1e-30 136.0 103 63.1
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 3.6e-30 135.2 108 63.0
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 8.1e-30 134.0 101 64.4
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 1.8e-29 132.9 129 55.0
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 2.4e-29 132.5 104 64.4
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 1.2e-28 130.2 129 52.7
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.2e-28 130.2 129 52.7
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.2e-28 130.2 129 52.7
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 1.5e-28 129.8 103 61.2
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 1.5e-28 129.8 128 52.3
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 2.0e-28 129.4 104 64.4
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 3.4e-28 128.6 128 54.7
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 3.4e-28 128.6 106 63.2
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 4.5e-28 128.3 105 62.9
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 5.8e-28 127.9 105 63.8
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 7.6e-28 127.5 129 51.9
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 7.6e-28 127.5 109 56.9
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 7.6e-28 127.5 132 50.8
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 7.6e-28 127.5 106 62.3
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 9.9e-28 127.1 103 60.2
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 1.7e-27 126.3 132 52.3
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 6.4e-27 124.4 103 55.3
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 1.4e-26 123.2 103 57.3
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 1.4e-26 123.2 103 57.3
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 1.4e-26 123.2 103 57.3
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 3.2e-26 122.1 135 48.1
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 3.2e-26 122.1 130 53.1
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 5.5e-26 121.3 103 55.3
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 1.2e-25 120.2 132 50.0
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 2.7e-25 119.0 105 56.2
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 6.0e-25 117.9 102 55.9
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 6.0e-25 117.9 104 56.7
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 1.3e-24 116.7 103 54.4
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 8.1e-22 107.5 94 58.5
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 1.8e-21 106.3 105 53.3
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 2.4e-21 105.9 94 57.4
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 1.2e-20 103.6 72 66.7
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 2.6e-20 102.4 117 47.9
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 4.5e-20 101.7 103 60.2
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 1.7e-19 99.8 111 46.8
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 2.5e-18 95.9 128 41.4
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 9.6e-15 84.0 120 45.8
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 9.6e-15 84.0 110 41.8
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.6e-14 83.2 118 45.8
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.6e-14 83.2 118 45.8
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 1.4e-13 80.1 102 42.2
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 5.0e-11 71.6 90 37.8


User provided reference genes

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