Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20358 Brassica carinata HOM05D005126 ORTHO05D006169 9.4e-197 690.3 419 100.0
BcaB04g20360 Brassica carinata HOM05D005126 ORTHO05D006169 5.2e-171 604.7 399 92.7
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 3.9e-166 588.6 399 90.2
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 4.1e-144 515.4 427 75.4
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 7.1e-144 514.6 427 75.4
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 4.6e-143 511.9 408 77.0
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 4.6e-143 511.9 408 77.0
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 2.7e-135 486.1 433 69.3
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 6.2e-132 474.9 433 67.2
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 4.5e-114 415.6 430 64.4
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 1.3e-110 404.1 431 63.1
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 8.2e-108 394.8 449 60.6
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 1.5e-98 364.0 433 58.9
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 3.5e-82 309.7 407 53.8
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 3.5e-74 283.1 426 48.6
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 2.6e-53 213.8 407 43.7
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 3.7e-52 209.9 408 43.1
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 1.1e-51 208.4 485 38.6
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 1.6e-50 204.5 412 41.7
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 2.7e-50 203.8 487 39.2
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 3.5e-50 203.4 491 37.5
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 3.5e-50 203.4 407 43.0
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 2.3e-49 200.7 424 40.1
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 6.6e-49 199.1 463 38.2
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 2.5e-48 197.2 403 40.9
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 3.3e-48 196.8 403 40.9
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 3.3e-48 196.8 513 36.1
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 7.3e-48 195.7 486 36.2
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 3.6e-47 193.4 513 35.1
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 6.2e-47 192.6 426 40.8
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 8.0e-47 192.2 412 41.0
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 1.4e-46 191.4 449 42.1
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 1.4e-46 191.4 510 34.1
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 1.8e-46 191.0 439 39.2
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 3.1e-46 190.3 473 34.9
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 3.1e-46 190.3 405 38.8
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 1.2e-45 188.3 403 39.7
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 2.6e-45 187.2 447 41.2
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 5.8e-45 186.0 454 38.3
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 5.8e-45 186.0 525 34.3
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 7.5e-45 185.7 460 36.1
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 2.9e-44 183.7 445 41.3
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 1.4e-43 181.4 447 37.8
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.9e-43 181.0 517 35.6
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 2.4e-43 180.6 493 34.1
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 4.1e-43 179.9 524 37.8
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 2.7e-42 177.2 474 34.8
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 3.5e-42 176.8 432 38.2
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 4.6e-42 176.4 432 37.5
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 6.0e-42 176.0 440 39.8
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 6.0e-42 176.0 439 36.4
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 6.0e-42 176.0 508 35.0
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 1.0e-41 175.3 419 37.5
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 1.3e-41 174.9 431 37.1
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 3.0e-41 173.7 423 38.3
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 5.0e-41 172.9 416 37.5
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 5.0e-41 172.9 439 38.3
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 8.6e-41 172.2 415 38.6
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 2.5e-40 170.6 488 35.2
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 3.3e-40 170.2 477 34.0
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 3.3e-40 170.2 427 35.1
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 4.3e-40 169.9 400 38.0
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 5.6e-40 169.5 403 38.5
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 7.3e-40 169.1 470 36.0
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 9.5e-40 168.7 403 40.9
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 1.6e-39 167.9 439 35.1
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 2.1e-39 167.5 397 36.8
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 2.8e-39 167.2 417 37.9
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 2.8e-39 167.2 487 32.0
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 3.6e-39 166.8 464 36.0
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 3.6e-39 166.8 425 36.2
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 8.1e-39 165.6 459 35.3
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 1.1e-38 165.2 398 37.2
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 1.8e-38 164.5 465 35.3
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 1.8e-38 164.5 449 34.3
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 2.3e-38 164.1 464 37.3
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 3.1e-38 163.7 439 34.6
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 4.0e-38 163.3 404 36.4
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 4.0e-38 163.3 409 36.7
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 1.5e-37 161.4 428 36.0
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.5e-37 161.4 431 35.3
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.5e-37 161.4 431 35.3
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 1.5e-37 161.4 456 35.3
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 2.6e-37 160.6 502 36.3
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 3.4e-37 160.2 414 37.4
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 3.4e-37 160.2 356 39.6
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 2.9e-36 157.1 466 34.5
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 4.9e-36 156.4 475 35.8
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 8.3e-36 155.6 435 34.5
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 5.4e-35 152.9 486 33.7
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 9.2e-35 152.1 449 34.7
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 1.2e-34 151.8 378 36.8
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 1.0e-33 148.7 254 46.9
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 1.7e-33 147.9 493 31.2
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 1.7e-33 147.9 227 50.2
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 1.9e-32 144.4 396 35.6
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 3.3e-32 143.7 463 35.0
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 2.1e-31 141.0 399 35.1
Oeu030881.1 Olea europaea HOM05D005126 ORTHO05D006169 8.9e-30 135.6 255 43.1
GSVIVG01002717001 Vitis vinifera HOM05D005126 ORTHO05D006169 2.4e-27 127.5 322 37.0
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 4.2e-27 126.7 414 35.0
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 6.6e-25 119.4 441 33.8
CDE12G0347 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.1e-24 118.6 334 35.3
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 9.6e-24 115.5 224 40.6
FAN25G0472 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.2e-23 115.2 193 44.0
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 3.4e-21 107.1 471 33.5
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 1.2e-18 98.6 262 36.6
GSVIVG01006464001 Vitis vinifera HOM05D005126 ORTHO05D006169 3.5e-18 97.1 403 37.0
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 6.0e-18 96.3 587 26.7
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 1.5e-16 91.7 171 43.3
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 1.4e-14 85.1 265 32.8
Cpa.g.sc871.1 Carica papaya HOM05D005126 ORTHO05D006169 1.8e-14 84.7 447 29.5
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 1.8e-14 84.7 280 33.2
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 2.4e-14 84.3 221 34.8
TAR626G0260 Trochodendron aralioides HOM05D005126 ORTHO05D006169 1.5e-13 81.6 146 42.5
Atru.chr10.2054 Acer truncatum HOM05D005126 ORTHO05D006169 9.9e-13 79.0 136 47.1
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 1.3e-12 78.6 327 30.3
TAR626G1585 Trochodendron aralioides HOM05D005126 ORTHO05D006169 4.9e-12 76.6 223 30.9
FvH4_3g03071 Fragaria vesca HOM05D005126 ORTHO05D006169 1.1e-11 75.5 125 46.4
Atru.chr10.2052 Acer truncatum HOM05D005126 ORTHO05D006169 2.4e-11 74.3 277 28.2
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 8.7e-09 65.9 56 64.3
CBR_g52260 Chara braunii HOM05D005126 ORTHO05D006169 1.8e-06 58.2 312 26.6
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 1.8e-06 58.2 299 28.4


User provided reference genes

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