Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 2.8e-38 161.4 78 100.0
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-35 152.9 78 94.9
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-35 152.9 78 94.9
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 5.0e-35 150.6 76 94.7
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 2.9e-27 124.8 66 92.4
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 8.0e-25 116.7 75 81.3
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 8.0e-25 116.7 75 81.3
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-24 116.3 74 81.1
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-24 116.3 74 81.1
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-24 116.3 74 81.1
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 4.4e-23 110.9 70 74.3
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 4.4e-23 110.9 70 74.3
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 4.4e-23 110.9 70 74.3
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 5.7e-23 110.5 70 74.3
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 5.7e-23 110.5 70 74.3
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 5.7e-23 110.5 70 74.3
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 3.7e-22 107.8 70 72.9
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 1.1e-21 106.3 74 75.7
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 1.1e-21 106.3 74 75.7
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 4.1e-21 104.4 74 73.0
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 3.5e-20 101.3 75 70.7
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 71 70.4
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 3.8e-19 97.8 74 66.2
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 6.6e-19 97.1 72 69.4
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 1.1e-18 96.3 75 65.3
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.5e-18 95.1 72 69.4
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 1.6e-17 92.4 64 71.9
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 2.8e-17 91.7 71 66.2
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 2.8e-17 91.7 72 63.9
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 3.6e-17 91.3 72 66.7
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 1.0e-16 89.7 71 62.0
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 1.4e-16 89.4 73 58.9
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 1.4e-16 89.4 73 58.9
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-16 89.4 73 58.9
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.3e-16 88.6 74 63.5
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 61.6
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 3.0e-16 88.2 73 61.6
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 6.8e-16 87.0 74 62.2
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 1.2e-15 86.3 71 62.0
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.5e-15 85.9 73 63.0
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 1.5e-15 85.9 71 62.0
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 1.5e-15 85.9 71 62.0
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 5.7e-15 84.0 71 59.2
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 2.2e-14 82.0 72 55.6
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 2.2e-14 82.0 74 55.4


User provided reference genes

Program Settings