Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20099 Brassica carinata HOM05D011153 ORTHO05D013195 1.3e-33 146.0 85 100.0
BcaC04g23162 Brassica carinata HOM05D011153 ORTHO05D013195 1.3e-33 146.0 85 100.0
A09p09760 Brassica napus HOM05D011153 ORTHO05D013195 5.1e-33 144.1 85 98.8
C09p11520 Brassica napus HOM05D011153 ORTHO05D013195 5.1e-33 144.1 85 98.8
BolC9t54042H Brassica oleracea HOM05D011153 ORTHO05D013195 5.1e-33 144.1 85 98.8
BraA09t36623Z Brassica rapa HOM05D011153 ORTHO05D013195 5.1e-33 144.1 85 98.8
BcaB04g20100 Brassica carinata HOM05D011153 ORTHO05D013195 2.7e-26 121.7 85 88.2
Sp2g29850 Schrenkiella parvula HOM05D011153 ORTHO05D013195 6.7e-17 90.5 56 73.2
Thhalv10005479m.g Eutrema salsugineum HOM05D011153 ORTHO05D013195 8.7e-17 90.1 56 71.4
AT5G66816 Arabidopsis thaliana HOM05D011153 ORTHO05D013195 1.6e-15 85.9 54 74.1
BcaC06g34752 Brassica carinata HOM05D011153 ORTHO05D013195 2.2e-15 85.5 56 71.4
C07p24950 Brassica napus HOM05D011153 ORTHO05D013195 2.2e-15 85.5 56 71.4
BolC7t43025H Brassica oleracea HOM05D011153 ORTHO05D013195 2.2e-15 85.5 56 71.4
CARHR280870 Cardamine hirsuta HOM05D011153 ORTHO05D013195 2.8e-15 85.1 59 67.8
AL8G44620 Arabidopsis lyrata HOM05D011153 ORTHO05D013195 8.2e-15 83.6 57 70.2
A07p17090 Brassica napus HOM05D011153 ORTHO05D013195 8.2e-15 83.6 56 69.6
BraA07t29436Z Brassica rapa HOM05D011153 ORTHO05D013195 8.2e-15 83.6 56 69.6
AL5G30750 Arabidopsis lyrata HOM05D011235 ORTHO05D012940 1.3e-07 59.7 54 63.0
Aa31LG4G18770 Aethionema arabicum HOM05D011235 ORTHO05D012940 3.7e-07 58.2 60 55.0
Sp5g11610 Schrenkiella parvula HOM05D011235 ORTHO05D012940 4.1e-06 54.7 40 62.5
CARHR160110 Cardamine hirsuta HOM05D011235 ORTHO05D012940 5.3e-06 54.3 40 62.5
BcaB01g00606 Brassica carinata HOM05D011235 ORTHO05D012940 6.9e-06 53.9 40 62.5
Thhalv10010927m.g Eutrema salsugineum HOM05D011235 ORTHO05D012940 6.9e-06 53.9 42 61.9


User provided reference genes

Program Settings