Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19992 Brassica carinata HOM05D000171 ORTHO05D000101 2.8e-57 224.9 105 100.0
BcaC04g23284 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-22 110.2 52 88.5
C09p10160 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-22 110.2 52 88.5
BolC9t53915H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-22 110.2 52 88.5
BcaB04g21422 Brassica carinata HOM05D000635 ORTHO05D000101 2.0e-18 95.9 52 73.1
BolC9t57934H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-15 86.7 51 68.6
BcaC04g23280 Brassica carinata HOM05D000171 ORTHO05D000101 4.5e-15 84.7 51 68.6
C09p10210 Brassica napus HOM05D000171 ORTHO05D000101 4.5e-15 84.7 51 68.6
C09p10250 Brassica napus HOM05D000171 ORTHO05D000101 4.5e-15 84.7 51 68.6
BolC9t53923H Brassica oleracea HOM05D000171 ORTHO05D000101 4.5e-15 84.7 51 68.6
BcaC07g40029 Brassica carinata HOM05D000171 ORTHO05D000101 5.9e-15 84.3 51 70.6
BraSC296t45960Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-14 83.2 50 64.0
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.5e-14 80.5 69 55.1
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.1e-12 75.9 69 50.7
Carub.0008s2335 Capsella rubella HOM05D000171 ORTHO05D000101 2.7e-12 75.5 67 50.7
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.7e-12 75.5 43 72.1
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-12 75.1 50 66.0
BcaNung03037 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-12 74.7 63 57.1
Thhalv10028181m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-11 73.6 43 67.4
AL8G39540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-11 72.8 65 50.8
AL8G39570 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-11 72.8 65 50.8
Thhalv10005666m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-10 69.3 42 64.3
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.4e-10 68.6 50 58.0
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.5e-10 67.4 40 72.5
Thhalv10004411m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.5e-10 67.4 40 72.5
Carub.0008s2318 Capsella rubella HOM05D000171 ORTHO05D000101 1.7e-09 66.2 43 65.1
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-09 65.9 67 50.7
Carub.0008s2317 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-09 65.5 46 60.9
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 3.7e-09 65.1 46 60.9
BolC2t12282H Brassica oleracea HOM05D000171 ORTHO05D000101 6.3e-09 64.3 38 65.8
Thhalv10029429m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-08 63.5 35 65.7
BraA02t09167Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-08 62.8 40 60.0
CARHR276410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.4e-08 61.2 47 61.7
Carub.0008s2333 Capsella rubella HOM05D000171 ORTHO05D000101 9.2e-08 60.5 47 59.6
CARHR276200 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-07 59.7 43 58.1
AL8G39590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.9e-07 57.8 37 64.9
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 57.0 41 63.4
CARHR257640 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-06 57.0 40 65.0
BraA10t43382Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-06 55.8 72 41.7
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.8e-06 55.1 38 57.9
AL3G47620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.6e-06 54.3 51 51.0


User provided reference genes

Program Settings