Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 1.0e-201 706.8 431 100.0
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 6.5e-169 597.8 427 90.6
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 8.8e-166 587.4 427 89.5
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 8.8e-166 587.4 427 89.5
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.1e-163 580.5 426 88.0
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 1.1e-163 580.5 426 78.2
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 6.6e-161 571.2 432 85.6
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 5.7e-157 558.1 432 86.1
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 9.8e-157 557.4 431 84.5
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 2.4e-155 552.7 430 83.3
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 1.7e-153 546.6 429 82.5
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 7.3e-152 541.2 431 78.7
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 1.2e-149 533.9 439 80.2
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 9.8e-149 530.8 426 81.5
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 7.8e-146 521.2 439 78.8
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 6.6e-145 518.1 330 85.8
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 3.4e-141 505.8 452 73.5
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 6.6e-129 464.9 429 71.6
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 7.3e-128 461.5 432 71.8
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 9.0e-118 427.9 428 71.3
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 1.4e-115 420.6 334 65.3
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 9.3e-115 417.9 334 65.3
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 3.9e-113 412.5 340 65.6
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.1e-112 411.0 333 66.4
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.1e-112 411.0 333 65.5
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 2.5e-112 409.8 334 64.7
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 1.4e-110 404.1 338 63.6
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 1.8e-110 403.7 334 66.2
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 1.8e-110 403.7 329 65.7
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 9.0e-110 401.4 337 63.8
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 9.0e-110 401.4 435 59.8
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 1.2e-109 401.0 333 63.1
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 1.5e-109 400.6 345 64.1
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 7.6e-109 398.3 324 65.7
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 2.2e-108 396.7 337 64.4
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.2e-108 396.7 345 62.3
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 2.9e-108 396.4 337 64.1
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 4.9e-108 395.6 330 63.9
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 4.9e-108 395.6 329 64.1
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 6.4e-108 395.2 328 63.7
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 6.4e-108 395.2 336 62.8
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 1.1e-107 394.4 337 63.8
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.9e-107 393.7 336 62.8
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 3.2e-107 392.9 321 65.4
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 2.1e-106 390.2 362 59.4
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 2.1e-106 390.2 336 62.5
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.7e-106 389.8 330 63.6
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 3.5e-106 389.4 331 63.4
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 3.5e-106 389.4 335 63.3
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 4.6e-106 389.0 334 64.1
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 6.0e-106 388.7 331 63.4
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 6.0e-106 388.7 336 62.5
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 7.9e-106 388.3 358 60.6
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 7.9e-106 388.3 330 62.7
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 1.9e-104 383.6 440 53.2
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 4.3e-104 382.5 337 62.3
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 4.3e-104 382.5 333 63.4
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 5.6e-104 382.1 329 62.6
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 5.6e-104 382.1 335 62.1
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 7.4e-104 381.7 336 62.2
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 9.6e-104 381.3 336 61.0
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 1.6e-103 380.6 326 63.5
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 2.1e-103 380.2 338 61.2
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 2.8e-103 379.8 335 59.7
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 3.7e-103 379.4 337 59.6
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 3.7e-103 379.4 343 61.8
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 4.8e-103 379.0 329 62.6
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 6.2e-103 378.6 339 59.3
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 1.1e-102 377.9 318 64.2
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-102 377.9 343 60.9
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 1.4e-102 377.5 343 61.2
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-102 377.5 343 61.2
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 4.0e-102 375.9 335 60.0
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 6.9e-102 375.2 331 61.9
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 1.2e-101 374.4 319 62.7
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.6e-101 373.2 331 61.0
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 5.8e-101 372.1 310 69.7
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 7.6e-101 371.7 337 60.2
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 3.8e-100 369.4 347 59.7
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 4.9e-100 369.0 433 55.0
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.1e-99 367.9 332 60.8
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-99 367.5 336 60.7
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 5.5e-99 365.5 334 58.4
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.6e-98 364.0 357 56.9
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 2.7e-98 363.2 338 59.2
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 3.5e-98 362.8 331 60.4
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 2.3e-97 360.1 383 53.3
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 3.9e-97 359.4 331 60.1
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 5.1e-97 359.0 345 56.2
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 6.7e-97 358.6 331 60.1
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 3.3e-96 356.3 363 56.7
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 1.6e-95 354.0 289 64.4
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 3.7e-95 352.8 296 61.5
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 4.8e-95 352.4 355 56.3
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 1.5e-93 347.4 319 58.0
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 2.0e-93 347.1 328 57.9
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 2.6e-93 346.7 341 57.2
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 1.7e-92 344.0 344 55.5
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 2.2e-92 343.6 348 56.3
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 3.2e-91 339.7 293 62.8
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 3.2e-91 339.7 308 58.8
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 5.1e-89 332.4 298 61.7
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 9.7e-88 328.2 450 46.4
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 2.8e-87 326.6 300 58.0
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 1.2e-85 321.2 328 56.4
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 1.7e-84 317.4 303 56.4
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 9.4e-83 311.6 306 55.6
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 3.6e-82 309.7 319 55.2
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 2.2e-79 300.4 351 50.7
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 2.6e-77 293.5 342 49.7
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 1.7e-71 274.2 300 53.7
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 3.6e-66 256.5 231 59.7
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 6.3e-63 245.7 228 59.2
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 7.2e-59 232.3 340 42.1
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 4.4e-56 223.0 221 57.9
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 1.3e-52 211.5 329 38.6
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 4.0e-49 199.9 183 64.5
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 2.4e-46 190.7 301 42.9
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 1.5e-43 181.4 157 66.9
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 1.2e-40 171.8 133 67.7
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.7e-37 160.6 154 59.1
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 1.0e-36 158.7 111 76.6
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 3.9e-36 156.8 177 52.5
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 1.9e-35 154.5 155 58.1
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 5.6e-35 152.9 117 63.2
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 9.5e-35 152.1 391 31.7
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 1.5e-32 144.8 262 36.3
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 1.7e-31 141.4 370 30.8
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 5.8e-24 116.3 102 59.8
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 4.9e-23 113.2 219 38.4
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 4.1e-22 110.2 113 54.9
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.3e-20 105.1 83 67.5
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 2.3e-20 104.4 173 37.6
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 6.2e-18 96.3 186 38.2
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.4e-17 95.1 69 65.2
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 1.4e-17 95.1 186 37.6
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 3.1e-17 94.0 68 70.6
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 5.2e-17 93.2 71 73.2
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 9.9e-16 89.0 73 63.0
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 1.7e-15 88.2 67 68.7
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.2e-15 87.8 141 43.3
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 2.9e-15 87.4 90 53.3
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 3.7e-15 87.0 343 28.0
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 6.4e-15 86.3 61 67.2
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 4.1e-14 83.6 57 70.2
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 4.1e-14 83.6 61 65.6
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 3.5e-13 80.5 139 41.0
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 1.3e-12 78.6 96 47.9
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 1.1e-09 68.9 346 28.3
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 6.8e-09 66.2 138 38.4
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 8.9e-09 65.9 95 46.3
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.6e-08 64.3 122 33.6
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 4.2e-06 57.0 30 83.3


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