Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19768 Brassica carinata HOM05D004081 ORTHO05D004935 2.4e-212 741.9 362 100.0
BolC9t53593H Brassica oleracea HOM05D004081 ORTHO05D004935 7.1e-201 703.7 363 93.9
BcaC04g23588 Brassica carinata HOM05D004081 ORTHO05D004935 1.6e-200 702.6 362 93.4
BolC2t11999H Brassica oleracea HOM05D004081 ORTHO05D004935 4.3e-182 641.3 362 84.5
Sp2g21850 Schrenkiella parvula HOM05D004081 ORTHO05D004935 2.8e-181 638.6 355 85.9
BcaB07g29982 Brassica carinata HOM05D004081 ORTHO05D004935 4.1e-180 634.8 363 84.6
BcaC03g17893 Brassica carinata HOM05D004081 ORTHO05D004935 2.6e-179 632.1 362 83.1
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 1.0e-178 630.2 359 83.3
BcaC04g23590 Brassica carinata HOM05D004081 ORTHO05D004935 3.2e-177 625.2 358 89.1
AT5G25770 Arabidopsis thaliana HOM05D004081 ORTHO05D004935 7.2e-177 624.0 360 82.2
Carub.0006s2355 Capsella rubella HOM05D004081 ORTHO05D004935 6.1e-176 620.9 354 83.3
Thhalv10004493m.g Eutrema salsugineum HOM05D004081 ORTHO05D004935 4.3e-174 614.8 353 82.2
CARHR187640 Cardamine hirsuta HOM05D004081 ORTHO05D004935 2.2e-173 612.5 345 85.5
Aa31LG11G4780 Aethionema arabicum HOM05D004081 ORTHO05D004935 2.3e-167 592.4 363 79.3
BolC2t12002H Brassica oleracea HOM05D004081 ORTHO05D004935 1.0e-162 577.0 406 70.4
Aa31LG11G4770 Aethionema arabicum HOM05D004081 ORTHO05D004935 1.0e-154 550.4 366 75.4
THA.LOC104815055 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.0e-154 550.4 351 74.1
THA.LOC104799704 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.3e-149 533.5 353 73.4
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 1.4e-148 530.0 349 70.2
BcaC03g17895 Brassica carinata HOM05D004081 ORTHO05D004935 8.5e-146 520.8 553 52.3
A09p06100 Brassica napus HOM05D004081 ORTHO05D004935 1.9e-145 519.6 258 95.3
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 1.2e-144 516.9 356 68.3
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 1.6e-144 516.5 350 69.1
Actinidia31231 Actinidia chinensis HOM05D004081 ORTHO05D004935 8.0e-144 514.2 352 68.2
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 5.2e-143 511.5 356 67.4
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 1.5e-142 510.0 350 67.7
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 9.8e-142 507.3 353 67.7
RcHm_v2.0_Chr6g0305921 Rosa chinensis HOM05D004081 ORTHO05D004935 1.7e-141 506.5 356 68.8
FvH4_2g35900 Fragaria vesca HOM05D004081 ORTHO05D004935 3.7e-141 505.4 358 67.3
FAN27G0952 Fragaria x ananassa HOM05D004081 ORTHO05D004935 3.7e-141 505.4 358 67.3
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 3.7e-141 505.4 350 67.7
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 6.3e-141 504.6 350 68.0
MELO3C003456.2 Cucumis melo HOM05D004081 ORTHO05D004935 6.3e-141 504.6 355 68.2
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 6.3e-141 504.6 352 67.6
Manes.03G062100 Manihot esculenta HOM05D004081 ORTHO05D004935 1.1e-140 503.8 357 67.2
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 1.4e-140 503.4 353 67.7
Duzib168G2093 Durio zibethinus HOM05D004081 ORTHO05D004935 1.8e-140 503.1 356 66.3
Gohir.D06G093900 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.8e-140 503.1 345 68.7
Gorai.010G108400 Gossypium raimondii HOM05D004081 ORTHO05D004935 1.8e-140 503.1 345 68.7
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 2.4e-140 502.7 350 67.7
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 3.1e-140 502.3 353 66.9
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 3.1e-140 502.3 349 68.2
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 1.2e-139 500.4 351 67.8
FAN20G0986 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.2e-139 500.4 357 67.5
TWI34G1344 Tripterygium wilfordii HOM05D004081 ORTHO05D004935 2.0e-139 499.6 347 69.5
CsaV3_3G048650 Cucumis sativus L. HOM05D004081 ORTHO05D004935 2.7e-139 499.2 355 67.6
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 2.7e-139 499.2 349 68.5
Manes.16G071800 Manihot esculenta HOM05D004081 ORTHO05D004935 4.5e-139 498.4 358 66.5
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 1.0e-138 497.3 351 68.7
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 1.3e-138 496.9 350 66.0
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 1.7e-138 496.5 344 66.9
Sed0008402 Sechium edule HOM05D004081 ORTHO05D004935 1.7e-138 496.5 355 65.9
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 2.2e-138 496.1 346 67.9
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 2.9e-138 495.7 351 65.0
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 6.5e-138 494.6 347 67.7
vmacro11071 Vaccinium macrocarpon HOM05D004081 ORTHO05D004935 8.5e-138 494.2 350 68.9
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 1.1e-137 493.8 349 66.2
PGR004G0014 Punica granatum HOM05D004081 ORTHO05D004935 1.1e-137 493.8 350 66.3
Ah.10g035110 Amaranthus hybridus HOM05D004081 ORTHO05D004935 1.9e-137 493.0 358 67.0
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 5.5e-137 491.5 354 64.4
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 9.5e-137 490.7 347 65.7
Sabra06G0188200 Salix brachista HOM05D004081 ORTHO05D004935 2.8e-136 489.2 360 67.2
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 3.6e-136 488.8 358 66.5
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 4.7e-136 488.4 349 65.9
ClCG11G015230 Citrullus lanatus HOM05D004081 ORTHO05D004935 6.1e-136 488.0 382 62.6
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 8.0e-136 487.6 348 66.4
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 1.0e-135 487.3 352 63.6
Thecc.09G041700 Theobroma cacao HOM05D004081 ORTHO05D004935 1.4e-135 486.9 352 64.8
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 1.8e-135 486.5 343 67.1
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 8.8e-135 484.2 363 64.7
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 8.8e-135 484.2 351 64.4
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 1.2e-134 483.8 352 64.5
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 2.0e-134 483.0 352 64.5
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 2.6e-134 482.6 356 64.3
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 2.6e-134 482.6 347 66.3
Aqoxy7G01585 Aquilegia oxysepala HOM05D004081 ORTHO05D004935 7.5e-134 481.1 348 66.7
Lsat_1_v5_gn_8_105500 Lactuca sativa HOM05D004081 ORTHO05D004935 7.5e-134 481.1 349 65.3
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 1.3e-133 480.3 346 66.2
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 3.7e-133 478.8 351 63.8
Cfa013350 Carpinus fangiana HOM05D004081 ORTHO05D004935 8.3e-133 477.6 349 64.5
Haze_21871 Corylus avellana HOM05D004081 ORTHO05D004935 8.3e-133 477.6 349 65.0
Psat5g023440 Pisum sativum HOM05D004081 ORTHO05D004935 8.3e-133 477.6 346 65.0
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 1.1e-132 477.2 346 65.0
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 1.4e-132 476.9 351 63.8
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 2.4e-132 476.1 381 60.1
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 7.0e-132 474.6 349 62.8
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 1.6e-131 473.4 347 64.8
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 1.0e-130 470.7 373 60.6
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 3.8e-130 468.8 352 63.6
AUR62029665 Chenopodium quinoa HOM05D004081 ORTHO05D004935 5.0e-130 468.4 359 64.1
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 6.6e-130 468.0 359 64.1
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 8.6e-130 467.6 411 57.2
SalBow4G2011 Salvia bowleyana HOM05D004081 ORTHO05D004935 5.6e-129 464.9 361 61.8
unitig_748.g7994 Utricularia gibba HOM05D004081 ORTHO05D004935 7.3e-129 464.5 357 63.9
CSS0003690 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.2e-128 463.8 303 70.0
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.4e-127 460.3 345 64.3
PSO566G0156 Papaver somniferum HOM05D004081 ORTHO05D004935 1.4e-127 460.3 345 64.3
SGA_v2.0_scaffold243G44290 Striga asiatica HOM05D004081 ORTHO05D004935 1.8e-127 459.9 335 65.1
Os06g0163200 Oryza sativa ssp. japonica HOM05D004081 ORTHO05D004935 3.4e-126 455.7 345 62.0
PSO782G5115 Papaver somniferum HOM05D004081 ORTHO05D004935 5.7e-126 454.9 345 63.2
CiPaw.07G206000 Carya illinoinensis HOM05D004081 ORTHO05D004935 7.5e-126 454.5 305 67.9
Lsat_1_v5_gn_8_134220 Lactuca sativa HOM05D004081 ORTHO05D004935 7.5e-126 454.5 321 65.4
AUR62041725 Chenopodium quinoa HOM05D004081 ORTHO05D004935 4.9e-125 451.8 334 65.0
Lalb_Chr08g0243191 Lupinus albus HOM05D004081 ORTHO05D004935 2.4e-124 449.5 349 63.0
Lsat_1_v5_gn_8_104541 Lactuca sativa HOM05D004081 ORTHO05D004935 5.4e-124 448.4 321 64.2
CAN.G21.43 Capsicum annuum HOM05D004081 ORTHO05D004935 7.0e-124 448.0 303 67.3
Psat5g023320 Pisum sativum HOM05D004081 ORTHO05D004935 9.2e-124 447.6 304 68.1
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 5.9e-123 444.9 322 65.8
MBI01_g30745_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 7.8e-123 444.5 310 66.5
Hma1.2p1_2102F.1_g314030 Hydrangea macrophylla HOM05D004081 ORTHO05D004935 2.3e-122 443.0 278 71.9
CSS0038651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 3.6e-120 435.6 303 66.7
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 6.2e-120 434.9 319 65.8
BolC2t12001H Brassica oleracea HOM05D004081 ORTHO05D004935 2.6e-118 429.5 292 72.6
Ciclev10009208m.g Citrus clementina HOM05D004081 ORTHO05D004935 6.4e-117 424.9 263 74.1
Lj7A705T29 Lonicera japonica HOM05D004081 ORTHO05D004935 1.2e-112 410.6 303 65.0
Lsat_1_v5_gn_8_104800 Lactuca sativa HOM05D004081 ORTHO05D004935 1.5e-110 403.7 321 58.9
CSS0042840 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.9e-108 396.7 335 59.4
Rhsim02G0180200 Rhododendron simsii HOM05D001113 ORTHO05D000968 3.0e-106 389.4 346 56.6
Phvul.009G105800 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 9.9e-102 374.4 379 51.5
CAN.G21.42 Capsicum annuum HOM05D004081 ORTHO05D004935 1.9e-100 370.2 246 69.1
Actinidia13318 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.1e-95 354.4 221 73.3
FAN15G1869 Fragaria x ananassa HOM05D004081 ORTHO05D004935 3.1e-95 352.8 257 66.9
Lsat_1_v5_gn_8_104461 Lactuca sativa HOM05D004081 ORTHO05D004935 2.6e-94 349.7 381 49.9
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 3.4e-94 349.4 382 49.0
VMungo0768G0001 Vigna mungo HOM05D004081 ORTHO05D004935 5.8e-94 348.6 373 48.5
Cpa.g.sc7.252 Carica papaya HOM05D004081 ORTHO05D004935 7.6e-94 348.2 249 67.1
Phvul.009G107301 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 6.0e-91 338.6 402 45.5
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 1.0e-90 337.8 247 63.2
AagrBONN_evm.TU.Sc2ySwM_228.1948 Anthoceros agrestis HOM05D004081 ORTHO05D004935 3.0e-90 336.3 365 47.4
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 3.0e-90 336.3 247 66.4
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 5.1e-90 335.5 326 52.8
HPP92_021511 Vanilla planifolia HOM05D004081 ORTHO05D004935 3.6e-88 329.3 295 57.3
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 1.1e-87 327.8 356 48.6
Mapoly0161s0002 Marchantia polymorpha HOM05D004081 ORTHO05D004935 2.0e-86 323.6 353 45.9
CAN.G21.41 Capsicum annuum HOM05D004081 ORTHO05D004935 2.2e-85 320.1 205 70.7
Dinv30265 Davidia involucrata HOM05D004081 ORTHO05D004935 6.4e-85 318.5 220 70.0
Zm00001eb271420 Zea mays HOM05D004081 ORTHO05D004935 1.0e-82 311.2 246 61.0
THA.LOC104809696 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.5e-81 307.4 196 75.5
ATR0121G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.9e-77 293.1 302 50.7
Glyma.04G081600 Glycine max HOM05D004081 ORTHO05D004935 3.8e-77 292.7 192 67.7
CAN.G21.44 Capsicum annuum HOM05D004081 ORTHO05D004935 4.2e-76 289.3 274 53.6
ATR0315G111 Amborella trichopoda HOM05D004081 ORTHO05D004935 1.8e-74 283.9 231 61.0
CSS0013583 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 5.1e-74 282.3 194 69.6
SMO089G0019 Selaginella moellendorffii HOM05D004081 ORTHO05D004935 1.1e-71 274.6 277 47.7
Eucgr.L00922 Eucalyptus grandis HOM05D004081 ORTHO05D004935 6.5e-69 265.4 196 65.3
CSS0028651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 4.6e-67 259.2 194 64.9
Lsat_1_v5_gn_8_104201 Lactuca sativa HOM05D004081 ORTHO05D004935 1.3e-64 251.1 343 42.9
Atru.chr7.2143 Acer truncatum HOM05D004081 ORTHO05D004935 2.7e-59 233.4 134 78.4
AL6G37600 Arabidopsis lyrata HOM05D004081 ORTHO05D004935 1.3e-48 198.0 161 62.7
MCO09G062 Micromonas commoda HOM05D004081 ORTHO05D004935 1.3e-45 188.0 358 31.0
Hund03408 Selenicereus undatus HOM05D004081 ORTHO05D004935 1.1e-44 184.9 126 65.1
SEGI_32132 Sequoiadendron giganteum HOM05D004081 ORTHO05D004935 7.2e-44 182.2 161 57.8
Lsat_1_v5_gn_0_34401 Lactuca sativa HOM05D004081 ORTHO05D004935 1.8e-42 177.6 206 47.6
BcaB05g25303 Brassica carinata HOM05D004081 ORTHO05D004935 1.3e-40 171.4 89 87.6
Medtr3g110115 Medicago truncatula HOM05D004081 ORTHO05D004935 3.5e-38 163.3 316 37.0
PRCOL_00003400 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 3.5e-38 163.3 305 29.5
Cre16.g676500 Chlamydomonas reinhardtii HOM05D004081 ORTHO05D004935 3.8e-37 159.8 223 35.4
Atru.chr7.2142 Acer truncatum HOM05D004081 ORTHO05D004935 1.0e-34 151.8 116 62.1
Nitab4.5_0000513g0070 Nicotiana tabacum HOM05D004081 ORTHO05D004935 9.7e-33 145.2 332 33.4
PRCOL_00002146 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 2.6e-25 120.6 207 33.3
HPP92_021483 Vanilla planifolia HOM05D004081 ORTHO05D004935 5.4e-15 86.3 61 62.3
ATR0241G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 4.5e-14 83.2 74 51.4
Cpa.g.sc7.250 Carica papaya HOM05D002779 ORTHO05D003074 4.7e-11 73.2 49 67.3
Ciclev10010051m.g Citrus clementina HOM05D004081 ORTHO05D004935 4.7e-11 73.2 75 48.0
Zm00001eb357480 Zea mays HOM05D002669 ORTHO05D004935 1.4e-10 71.6 69 47.8
Zm00001eb288810 Zea mays HOM05D002669 ORTHO05D004935 3.0e-10 70.5 69 47.8
Oeu014640.1 Olea europaea HOM05D004081 ORTHO05D025646 2.0e-09 67.8 77 48.1


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