Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19692 Brassica carinata HOM05D008717 ORTHO05D096016 2.5e-219 765.4 454 100.0
BcaC06g33146 Brassica carinata HOM05D008717 ORTHO05D095686 1.4e-169 600.1 402 90.5
C04p52020 Brassica napus HOM05D008717 ORTHO05D023883 1.1e-102 377.9 400 64.2
A05p15340 Brassica napus HOM05D008717 ORTHO05D023883 3.5e-96 356.3 409 64.8
BraA05t20452Z Brassica rapa HOM05D008717 ORTHO05D023883 3.5e-96 356.3 409 64.8
BcaB04g19945 Brassica carinata HOM05D008717 ORTHO05D092441 4.4e-91 339.3 304 69.4
BcaB07g32440 Brassica carinata HOM05D008717 ORTHO05D023883 6.8e-84 315.5 298 66.8
A04p35080 Brassica napus HOM05D008717 ORTHO05D015513 7.6e-75 285.4 354 58.2
A09p35750 Brassica napus HOM05D008717 ORTHO05D015513 2.2e-74 283.9 355 59.2
BraA09t39098Z Brassica rapa HOM05D008717 ORTHO05D015513 1.7e-71 274.2 354 57.9
BolC1t00550H Brassica oleracea HOM05D008717 ORTHO05D015513 7.8e-64 248.8 359 53.8
C07p63640 Brassica napus HOM05D008717 ORTHO05D015513 3.3e-62 243.4 357 53.5
BcaC02g08614 Brassica carinata HOM05D008717 ORTHO05D023883 5.4e-57 226.1 283 53.0
BcaNung00354 Brassica carinata HOM05D008717 ORTHO05D015513 1.3e-53 214.9 262 58.4
BolC7t46777H Brassica oleracea HOM05D008717 ORTHO05D015513 2.6e-51 207.2 347 49.0
BolC4t22252H Brassica oleracea HOM05D008717 ORTHO05D015513 9.9e-51 205.3 355 46.5
BraA07t30732Z Brassica rapa HOM05D008717 ORTHO05D015513 1.3e-47 194.9 240 61.2
BraA05t19688Z Brassica rapa HOM05D008717 ORTHO05D024641 3.0e-47 193.7 346 45.1
C02p52260 Brassica napus HOM05D008717 ORTHO05D024632 2.5e-46 190.7 193 64.8
BcaNung01471 Brassica carinata HOM05D008717 ORTHO05D021774 3.2e-41 173.7 233 57.9
C09p01520 Brassica napus HOM05D008717 ORTHO05D024641 4.2e-41 173.3 323 43.0
BcaC02g12220 Brassica carinata HOM05D008717 ORTHO05D015513 3.9e-39 166.8 301 46.8
C04p52780 Brassica napus HOM05D008717 ORTHO05D042284 6.9e-36 156.0 398 36.2
BcaC09g48833 Brassica carinata HOM05D008717 ORTHO05D021774 4.5e-35 153.3 167 60.5
C02p28240 Brassica napus HOM05D008717 ORTHO05D024641 1.9e-33 147.9 212 53.3
BolC2t08869H Brassica oleracea HOM05D008717 ORTHO05D024641 1.9e-33 147.9 212 53.3
C09p22850 Brassica napus HOM05D008717 ORTHO05D024632 5.5e-33 146.4 146 66.4
BolC9t55205H Brassica oleracea HOM05D008717 ORTHO05D024632 5.5e-33 146.4 146 66.4
BolC4t26843H Brassica oleracea HOM05D008717 ORTHO05D042284 4.6e-32 143.3 398 39.4
BcaC04g20205 Brassica carinata HOM05D008717 ORTHO05D021774 8.2e-29 132.5 172 58.7
C02p32710 Brassica napus HOM05D008717 ORTHO05D024641 8.2e-29 132.5 185 53.5
BraA03t14720Z Brassica rapa HOM05D008717 ORTHO05D024632 9.1e-28 129.0 149 58.4
C05p46230 Brassica napus HOM05D010710 ORTHO05D021711 2.0e-27 127.9 283 46.3
C06p09430 Brassica napus HOM05D008717 ORTHO05D024632 5.9e-27 126.3 149 57.0
A09p07390 Brassica napus HOM05D010710 ORTHO05D021711 7.7e-27 125.9 282 44.3
C02p53780 Brassica napus HOM05D008717 ORTHO05D015513 2.2e-26 124.4 203 51.2
BcaC05g28531 Brassica carinata HOM05D010710 ORTHO05D021711 2.0e-22 111.3 249 45.0
A02p13550 Brassica napus HOM05D008717 ORTHO05D097157 2.0e-22 111.3 123 60.2
C01p45440 Brassica napus HOM05D008717 ORTHO05D021774 7.4e-22 109.4 111 63.1
BolC9t54809H Brassica oleracea HOM05D010710 ORTHO05D021711 2.8e-21 107.5 280 41.8
C07p52460 Brassica napus HOM05D008717 ORTHO05D021774 4.8e-21 106.7 105 64.8
BraA09t36393Z Brassica rapa HOM05D010710 ORTHO05D021711 5.3e-20 103.2 280 41.8
A07p17370 Brassica napus HOM05D008717 ORTHO05D015513 1.5e-19 101.7 144 57.6
BcaB04g18013 Brassica carinata HOM05D008717 ORTHO05D096086 5.9e-19 99.8 71 87.3
BolC1t00702H Brassica oleracea HOM05D010710 ORTHO05D021711 6.5e-18 96.3 281 39.9
C02p42070 Brassica napus HOM05D008717 ORTHO05D099702 3.5e-11 73.9 134 40.3
C09p51210 Brassica napus HOM05D009052 ORTHO05D014876 1.3e-10 72.0 158 45.6
C05p53750 Brassica napus HOM05D010710 ORTHO05D014876 1.1e-09 68.9 160 45.0
BcaC05g29135 Brassica carinata HOM05D010710 ORTHO05D094223 1.6e-08 65.1 185 37.8
BolC9t57984H Brassica oleracea HOM05D009052 ORTHO05D014876 1.5e-06 58.5 121 43.8


User provided reference genes

Program Settings