Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 5.7e-197 690.6 334 100.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 5.4e-163 577.8 341 83.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.4e-163 577.8 341 83.3
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.3e-161 573.2 336 84.8
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 6.9e-158 560.8 342 81.6
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 6.9e-158 560.8 342 81.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.5e-157 559.7 341 80.9
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 1.6e-154 549.7 340 80.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.0e-153 547.0 339 81.4
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 6.9e-150 534.3 339 77.9
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.3e-145 519.2 341 76.5
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.1e-145 518.1 339 75.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 6.5e-140 501.1 312 78.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 9.3e-131 470.7 339 70.5
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 2.2e-119 433.0 344 63.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.4e-118 429.5 335 64.8
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.2e-117 427.2 335 64.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 4.5e-117 425.2 337 63.2
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 6.5e-116 421.4 333 63.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 6.5e-116 421.4 344 62.5
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 5.5e-115 418.3 344 62.2
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.6e-114 416.8 344 61.0
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.8e-113 413.3 314 63.4
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 6.7e-113 411.4 346 61.3
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-112 410.6 333 61.9
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.5e-112 410.2 345 58.8
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.0e-112 409.8 354 59.9
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 4.8e-111 405.2 342 61.4
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.1e-110 404.1 340 60.6
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.4e-110 403.7 339 60.8
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.4e-110 403.7 345 59.7
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.4e-110 403.7 338 60.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.8e-110 403.3 344 59.6
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 2.4e-110 402.9 339 60.5
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.4e-110 402.9 337 61.1
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.1e-110 401.0 338 60.4
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.5e-109 399.1 333 59.5
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.5e-109 399.1 317 65.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.5e-109 398.7 340 59.1
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 4.5e-109 398.7 346 58.4
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.0e-108 397.5 307 65.1
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.7e-108 396.7 339 61.1
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 5.0e-108 395.2 364 58.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 5.0e-108 395.2 307 63.2
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.0e-108 395.2 351 59.0
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 6.5e-108 394.8 337 60.8
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.5e-108 394.8 354 58.2
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 8.5e-108 394.4 305 63.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 2.5e-107 392.9 307 62.9
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.5e-107 392.9 348 57.8
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 5.5e-107 391.7 356 58.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 9.4e-107 391.0 340 59.1
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 9.4e-107 391.0 330 59.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 9.4e-107 391.0 341 58.1
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.6e-106 390.2 344 59.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-106 390.2 318 62.3
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 3.6e-106 389.0 335 59.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 4.7e-106 388.7 341 59.8
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.0e-105 387.5 331 60.7
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.4e-105 387.1 340 58.8
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.4e-105 387.1 338 58.0
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.0e-105 386.0 351 57.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.1e-104 384.0 303 62.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 5.7e-104 381.7 349 57.3
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.3e-103 380.6 315 62.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 3.7e-103 379.0 309 61.2
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.7e-103 379.0 311 62.7
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.3e-103 378.3 305 63.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 3.1e-102 375.9 359 56.0
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.3e-102 375.2 350 56.9
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.0e-101 373.2 334 56.3
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.5e-101 372.5 314 59.9
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.5e-101 372.1 315 61.9
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 5.9e-101 371.7 311 59.5
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.0e-100 370.9 330 56.7
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.5e-99 366.3 325 57.8
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.2e-99 365.5 330 57.6
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.5e-99 365.2 319 58.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.2e-98 364.0 315 59.4
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.7e-98 362.8 348 55.5
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 2.7e-98 362.8 351 55.0
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.0e-97 360.9 351 55.0
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.8e-97 358.2 317 59.3
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.2e-96 357.5 316 58.5
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.4e-96 355.5 289 64.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.3e-95 351.7 303 60.1
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 3.1e-94 349.4 347 55.3
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 4.5e-93 345.5 274 61.7
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.1e-91 340.9 305 55.4
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.8e-89 333.6 289 60.6
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.6e-88 329.7 216 71.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 3.4e-88 329.3 232 66.8
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.2e-87 326.6 274 59.1
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.8e-87 326.2 301 56.1
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.2e-85 320.9 324 54.6
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.6e-85 320.5 257 60.7
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 9.5e-83 311.2 353 49.0
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 6.1e-82 308.5 317 50.2
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.4e-78 296.6 281 54.8
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 4.0e-73 279.3 140 100.0
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.2e-69 267.7 251 58.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.0e-69 266.9 345 44.9
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 7.1e-62 241.9 309 42.1
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 9.2e-62 241.5 365 38.6
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.8e-61 238.4 293 44.7
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.6e-58 230.7 291 43.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.1e-58 230.3 219 57.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.4e-54 216.9 224 54.0
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 3.2e-54 216.5 233 44.2
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 2.1e-53 213.8 233 50.6
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.7e-52 210.7 312 41.7
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 5.1e-52 209.1 215 52.6
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.3e-43 179.9 333 35.4
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.0e-40 170.6 297 36.7
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-39 167.5 185 50.3
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 4.6e-29 132.9 106 55.7
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.6e-24 115.5 154 48.7
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.4e-22 111.3 189 39.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.9e-15 87.0 55 74.5
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 2.1e-13 80.9 165 38.2
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 6.9e-09 65.9 101 39.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 7.2e-06 55.8 33 69.7


User provided reference genes

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