Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 4.4e-209 731.1 384 100.0
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 2.5e-196 688.7 384 94.5
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 4.0e-194 681.4 384 94.5
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 1.1e-191 673.3 384 93.2
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 1.1e-191 673.3 384 93.2
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 3.2e-191 671.8 384 93.0
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 5.4e-191 671.0 383 93.2
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 4.7e-187 657.9 384 91.4
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 3.2e-183 645.2 384 89.6
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 3.5e-182 641.7 384 89.3
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 1.3e-181 639.8 384 89.3
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 8.7e-181 637.1 384 88.8
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 4.0e-178 628.2 384 86.7
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 1.2e-177 626.7 384 86.7
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 2.6e-177 625.5 384 86.2
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 8.7e-173 610.5 384 84.4
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 1.2e-169 600.1 384 85.7
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 2.8e-163 578.9 388 79.1
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 1.8e-154 549.7 389 76.3
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 1.6e-150 536.6 388 73.2
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 6.7e-149 531.2 388 72.9
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 1.1e-148 530.4 387 71.8
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 9.7e-148 527.3 387 71.6
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 2.0e-145 519.6 387 70.5
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 3.4e-145 518.8 387 71.1
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 7.7e-145 517.7 388 69.8
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 1.0e-144 517.3 387 70.0
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 2.9e-144 515.8 387 70.3
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 3.8e-144 515.4 387 69.5
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 5.0e-144 515.0 387 70.0
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 1.4e-143 513.5 385 71.2
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 1.9e-143 513.1 387 69.8
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 2.5e-143 512.7 387 69.8
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 2.5e-143 512.7 387 70.0
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 1.2e-142 510.4 388 69.6
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 1.6e-142 510.0 387 69.8
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 2.1e-142 509.6 388 70.4
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 3.6e-142 508.8 387 69.3
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 4.6e-142 508.4 388 70.6
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 4.6e-142 508.4 387 69.8
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 1.8e-141 506.5 388 68.6
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.3e-141 506.1 387 69.3
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 2.5e-140 502.7 387 69.3
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 3.3e-140 502.3 387 68.2
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 4.3e-140 501.9 387 67.4
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 5.7e-140 501.5 387 68.2
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 5.7e-140 501.5 405 67.4
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 7.4e-140 501.1 387 68.7
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 2.2e-139 499.6 387 67.2
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 3.7e-139 498.8 387 68.0
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 3.7e-139 498.8 387 68.2
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 3.7e-139 498.8 386 68.1
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 4.8e-139 498.4 387 66.7
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 4.8e-139 498.4 381 69.8
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 4.8e-139 498.4 388 68.8
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 8.2e-139 497.7 387 68.2
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 1.8e-138 496.5 388 68.6
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 1.8e-138 496.5 387 68.7
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 1.8e-138 496.5 385 67.8
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 5.3e-138 495.0 387 68.0
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 1.5e-137 493.4 386 67.1
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 1.5e-137 493.4 389 65.3
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 2.0e-137 493.0 387 67.4
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 3.4e-137 492.3 387 67.2
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 4.5e-137 491.9 390 67.4
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 1.0e-136 490.7 387 68.2
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.0e-136 490.7 387 67.2
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 1.3e-136 490.3 387 67.4
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 1.7e-136 490.0 387 67.4
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 2.9e-136 489.2 387 67.2
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.8e-136 488.8 387 67.4
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 3.8e-136 488.8 387 67.7
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 3.8e-136 488.8 387 67.7
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 1.4e-135 486.9 388 67.3
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 2.5e-135 486.1 388 67.5
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 3.2e-135 485.7 387 67.4
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 4.2e-135 485.3 387 67.4
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 5.5e-135 485.0 387 66.4
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.1e-134 483.0 387 66.9
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 3.6e-134 482.3 387 65.4
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.4e-133 480.3 388 66.0
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 2.3e-133 479.6 387 66.9
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 3.0e-133 479.2 387 66.4
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 3.9e-133 478.8 388 67.3
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 5.1e-133 478.4 399 64.7
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 5.1e-133 478.4 387 66.4
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 1.7e-131 473.4 385 64.7
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 2.8e-131 472.6 386 65.5
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 1.8e-130 469.9 387 65.4
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 2.4e-130 469.5 387 66.1
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-129 467.2 388 64.2
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-129 467.2 388 64.2
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.0e-129 466.5 419 61.8
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 2.6e-129 466.1 387 63.3
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.6e-129 466.1 419 62.1
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 5.9e-129 464.9 412 63.3
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.7e-128 463.4 419 61.8
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 2.2e-128 463.0 387 65.6
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.5e-127 459.5 419 61.1
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 5.5e-127 458.4 387 63.3
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.1e-126 456.4 387 62.5
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 2.1e-126 456.4 388 62.9
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 2.7e-126 456.1 354 67.8
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 2.7e-126 456.1 387 62.5
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 8.0e-126 454.5 355 68.5
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 2.6e-124 449.5 353 68.3
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 9.7e-124 447.6 387 62.8
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 1.3e-123 447.2 354 67.2
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 4.1e-122 442.2 389 60.4
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 1.4e-117 427.2 387 62.3
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 3.4e-116 422.5 333 66.1
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 5.7e-116 421.8 390 57.4
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.7e-115 419.1 334 65.6
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 4.8e-115 418.7 392 58.2
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 5.9e-113 411.8 379 58.3
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 3.2e-111 406.0 401 58.6
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 3.6e-110 402.5 389 55.0
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 1.4e-109 400.6 400 56.0
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 4.9e-107 392.1 385 58.4
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 1.1e-106 391.0 395 54.7
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.6e-105 387.1 385 56.4
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 4.0e-101 372.5 385 56.9
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 8.3e-99 364.8 294 62.2
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 1.4e-90 337.4 275 66.2
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 1.7e-88 330.5 416 46.6
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 1.4e-82 310.8 438 42.2
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 2.5e-79 300.1 370 45.9
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 1.2e-73 281.2 270 58.1
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 5.1e-72 275.8 303 54.8
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.9e-71 273.9 236 63.1
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 2.4e-69 266.9 390 41.3
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 2.6e-60 236.9 468 36.5
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 1.2e-52 211.5 164 68.9
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 1.1e-50 204.9 238 45.4
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.8e-46 190.3 168 60.7
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.3e-43 181.4 149 67.8
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 2.9e-35 153.7 123 66.7
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.2e-34 150.2 392 29.8
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 3.6e-33 146.7 174 54.0
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 4.1e-29 133.3 266 38.0
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 3.2e-26 123.6 108 57.4
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 3.2e-26 123.6 84 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 4.6e-25 119.8 213 37.6
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 3.9e-24 116.7 150 47.3
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 3.3e-23 113.6 156 46.2
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 2.4e-21 107.5 74 67.6
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 6.9e-21 105.9 137 48.9
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 3.4e-20 103.6 121 51.2
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 4.7e-17 93.2 131 47.3
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 6.1e-17 92.8 70 62.9
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 5.2e-16 89.7 131 46.6
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 7.4e-15 85.9 86 50.0
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 1.8e-13 81.3 83 50.6
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 1.2e-12 78.6 83 44.6
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 7.7e-12 75.9 129 41.1
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 7.7e-12 75.9 107 46.7
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 2.9e-11 73.9 45 84.4
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 1.5e-10 71.6 47 68.1
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 1.9e-10 71.2 97 50.5
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 7.2e-10 69.3 42 85.7
RcHm_v2.0_Chr3g0454471 Rosa chinensis HOM05D004239 ORTHO05D005191 8.8e-08 62.4 36 83.3
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 1.5e-07 61.6 103 43.7
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 2.0e-07 61.2 38 81.6
Zm00001eb019540 Zea mays HOM05D000931 ORTHO05D001924 1.3e-06 58.5 38 76.3
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 8.2e-06 55.8 49 51.0


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