Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19596 Brassica carinata HOM05D000562 ORTHO05D000388 3.5e-49 198.0 99 100.0
BcaB04g19595 Brassica carinata HOM05D000562 ORTHO05D000388 2.2e-27 125.6 60 100.0
BcaC06g30716 Brassica carinata HOM05D000690 ORTHO05D000388 2.0e-17 92.4 60 78.3
BraA06t26772Z Brassica rapa HOM05D000690 ORTHO05D000388 6.0e-17 90.9 60 73.3
A06p38570 Brassica napus HOM05D000690 ORTHO05D000388 6.6e-16 87.4 60 71.7
C07p39680 Brassica napus HOM05D000690 ORTHO05D000388 8.6e-16 87.0 60 70.0
BolC7t44492H Brassica oleracea HOM05D000690 ORTHO05D000388 8.6e-16 87.0 60 70.0
Sp2g19470 Schrenkiella parvula HOM05D000562 ORTHO05D000388 1.9e-15 85.9 63 73.0
BcaC04g23751 Brassica carinata HOM05D000690 ORTHO05D000388 1.2e-14 83.2 60 76.7
C09p05110 Brassica napus HOM05D000562 ORTHO05D000388 1.2e-14 83.2 60 76.7
BraA09t36109Z Brassica rapa HOM05D000562 ORTHO05D000388 1.6e-14 82.8 60 75.0
BolC9t53434H Brassica oleracea HOM05D000562 ORTHO05D000388 8.1e-14 80.5 60 75.0
Thhalv10005101m.g Eutrema salsugineum HOM05D000690 ORTHO05D000388 1.8e-13 79.3 63 69.8
A09p04730 Brassica napus HOM05D000562 ORTHO05D000388 6.8e-13 77.4 60 73.3
Aa31sc105G120 Aethionema arabicum HOM05D000562 ORTHO05D000388 7.5e-12 73.9 70 62.9
CARHR182620 Cardamine hirsuta HOM05D000562 ORTHO05D000388 4.6e-09 64.7 66 53.0
THA.LOC104827335 Tarenaya hassleriana HOM05D000690 ORTHO05D000388 6.6e-08 60.8 61 50.8


User provided reference genes

Program Settings