Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19468 Brassica carinata HOM05D000675 ORTHO05D032205 2.4e-274 948.3 535 100.0
C06p13550 Brassica napus HOM05D000675 ORTHO05D032205 1.3e-81 308.1 332 54.2
BolC6t36519H Brassica oleracea HOM05D000675 ORTHO05D032205 7.0e-80 302.4 333 53.8
C05p14130 Brassica napus HOM05D000675 ORTHO05D021717 1.3e-78 298.1 605 35.4
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 5.0e-78 296.2 627 34.6
BcaC05g25609 Brassica carinata HOM05D000675 ORTHO05D021717 2.1e-76 290.8 630 33.8
BolC5t30144H Brassica oleracea HOM05D000675 ORTHO05D021717 2.6e-74 283.9 595 34.8
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 2.6e-74 283.9 603 34.7
BcaC05g29077 Brassica carinata HOM05D000675 ORTHO05D031848 7.6e-66 255.8 535 36.6
BolC5t33964H Brassica oleracea HOM05D000675 ORTHO05D031780 1.1e-51 208.8 193 54.9
A07p06770 Brassica napus HOM05D000675 ORTHO05D021717 2.4e-51 207.6 529 31.6
C07p04390 Brassica napus HOM05D000675 ORTHO05D031780 7.9e-47 192.6 190 52.1
BcaC08g46109 Brassica carinata HOM05D000675 ORTHO05D031780 1.5e-45 188.3 166 59.0
C07p04380 Brassica napus HOM05D000675 ORTHO05D031848 1.5e-34 151.8 370 33.2
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-30 136.7 606 27.1
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-29 135.2 555 27.4
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-29 133.7 554 28.7
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 9.7e-29 132.5 561 31.9
BcaB05g24759 Brassica carinata HOM05D000675 ORTHO05D000395 6.9e-27 126.3 557 29.3
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-25 122.5 538 31.8
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-25 121.3 240 37.9
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 2.9e-25 120.9 556 28.1
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 5.0e-25 120.2 566 28.8
BolC7t40833H Brassica oleracea HOM05D000675 ORTHO05D031848 1.1e-24 119.0 336 31.5
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-24 116.7 539 26.7
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 7.2e-24 116.3 570 28.6
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 9.4e-24 115.9 523 26.8
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-23 114.8 558 26.9
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 4.6e-23 113.6 571 27.1
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-22 111.3 579 26.8
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-22 110.9 551 26.9
BcaC01g02627 Brassica carinata HOM05D000675 ORTHO05D013510 8.8e-22 109.4 569 26.0
A05p09860 Brassica napus HOM05D000675 ORTHO05D002086 4.3e-21 107.1 648 26.7
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 7.4e-21 106.3 556 28.8
BolC5t31342H Brassica oleracea HOM05D000675 ORTHO05D039875 4.8e-20 103.6 127 46.5
BraA09t40504Z Brassica rapa HOM05D000675 ORTHO05D011634 4.8e-20 103.6 504 30.4
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 6.3e-20 103.2 550 28.2
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 6.9e-19 99.8 240 35.4
A09p29990 Brassica napus HOM05D000675 ORTHO05D002086 6.9e-19 99.8 555 27.9
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-18 98.2 573 26.0
BolC1t04292H Brassica oleracea HOM05D000675 ORTHO05D013510 2.0e-18 98.2 557 27.8
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-17 95.9 547 25.0
BraA02t09250Z Brassica rapa HOM05D000675 ORTHO05D000395 1.3e-17 95.5 238 33.6
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-17 95.1 262 30.5
A03p67890 Brassica napus HOM05D000675 ORTHO05D042509 6.5e-17 93.2 233 33.9
BraA01t02680Z Brassica rapa HOM05D000675 ORTHO05D042509 6.5e-17 93.2 233 33.9
BolC6t38380H Brassica oleracea HOM05D000675 ORTHO05D021814 8.5e-17 92.8 553 25.5
BcaC02g09509 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-16 92.4 537 24.4
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 2.5e-16 91.3 136 40.4
C05p17940 Brassica napus HOM05D000675 ORTHO05D011634 2.5e-16 91.3 172 36.0
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 2.5e-16 91.3 530 27.7
BcaC06g36056 Brassica carinata HOM05D000675 ORTHO05D013510 3.2e-16 90.9 555 27.7
BolC5t33353H Brassica oleracea HOM05D000675 ORTHO05D013510 3.2e-16 90.9 136 39.0
C07p21230 Brassica napus HOM05D000675 ORTHO05D000395 4.2e-16 90.5 215 32.6
BolC9t54103H Brassica oleracea HOM05D000675 ORTHO05D011634 5.5e-16 90.1 248 31.0
BcaB01g02521 Brassica carinata HOM05D000675 ORTHO05D011634 7.2e-16 89.7 192 33.9
BcaC09g49036 Brassica carinata HOM05D000675 ORTHO05D013510 9.4e-16 89.4 561 31.4
BcaC03g17480 Brassica carinata HOM05D000675 ORTHO05D039875 1.6e-15 88.6 125 41.6
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 1.6e-15 88.6 537 25.0
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 2.1e-15 88.2 245 31.8
C03p58380 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-15 88.2 583 25.7
BcaB04g18178 Brassica carinata HOM05D000675 ORTHO05D011634 2.7e-15 87.8 155 33.5
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 2.7e-15 87.8 140 40.7
BcaB03g15593 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-14 85.5 598 24.1
BcaB02g11371 Brassica carinata HOM05D000675 ORTHO05D011634 1.8e-14 85.1 136 39.0
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 1.8e-14 85.1 511 27.6
A07p04090 Brassica napus HOM05D021433 ORTHO05D019850 2.3e-14 84.7 282 32.6
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-14 84.7 130 41.5
BcaC05g25846 Brassica carinata HOM05D000675 ORTHO05D011634 3.0e-14 84.3 173 35.8
BolC5t30501H Brassica oleracea HOM05D000675 ORTHO05D011634 3.0e-14 84.3 173 35.8
C09p12140 Brassica napus HOM05D000675 ORTHO05D011634 3.9e-14 84.0 132 37.1
BraA05t22466Z Brassica rapa HOM05D000675 ORTHO05D000395 5.1e-14 83.6 256 32.0
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 6.7e-14 83.2 518 28.2
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 1.1e-13 82.4 546 22.3
BolC7t41640H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-13 82.4 333 28.8
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-13 82.0 142 38.7
C07p08420 Brassica napus HOM05D000675 ORTHO05D013510 1.5e-13 82.0 515 26.2
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 2.0e-13 81.6 654 24.3
C03p47140 Brassica napus HOM05D000675 ORTHO05D011634 3.3e-13 80.9 216 31.0
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-13 80.5 569 23.0
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 4.4e-13 80.5 565 28.3
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-13 80.5 192 34.4
BolC1t04030H Brassica oleracea HOM05D000675 ORTHO05D000395 5.7e-13 80.1 263 31.6
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 1.3e-12 79.0 126 36.5
BraA01t00879Z Brassica rapa HOM05D000675 ORTHO05D003044 1.3e-12 79.0 130 37.7
BcaC05g26577 Brassica carinata HOM05D000675 ORTHO05D093155 1.7e-12 78.6 143 35.0
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-12 78.2 587 24.2
BraA04t16728Z Brassica rapa HOM05D000675 ORTHO05D000395 2.2e-12 78.2 274 30.7
A02p36620 Brassica napus HOM05D000675 ORTHO05D021814 4.8e-12 77.0 450 28.0
BcaB04g17899 Brassica carinata HOM05D000675 ORTHO05D011634 8.2e-12 76.3 591 23.5
BcaB01g01871 Brassica carinata HOM05D000675 ORTHO05D011634 1.4e-11 75.5 538 25.5
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-11 75.5 128 38.3
C09p57870 Brassica napus HOM05D000675 ORTHO05D011634 1.4e-11 75.5 131 35.9
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-11 74.7 244 31.1
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 2.4e-11 74.7 154 33.1
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-11 74.3 629 25.9
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 3.1e-11 74.3 108 35.2
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-11 73.9 546 23.3
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 9.1e-11 72.8 188 30.3
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 9.1e-11 72.8 555 23.2
A03p67550 Brassica napus HOM05D000675 ORTHO05D027218 1.2e-10 72.4 106 36.8
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-10 72.0 503 26.4
C09p22720 Brassica napus HOM05D000675 ORTHO05D003044 2.0e-10 71.6 174 34.5
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 3.5e-10 70.9 376 26.1
C03p49530 Brassica napus HOM05D000675 ORTHO05D042561 3.5e-10 70.9 89 41.6
BolC3t17250H Brassica oleracea HOM05D000675 ORTHO05D042561 3.5e-10 70.9 89 41.6
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-10 70.5 544 24.1
BcaC01g02115 Brassica carinata HOM05D000675 ORTHO05D003044 5.9e-10 70.1 271 28.4
BcaB07g33523 Brassica carinata HOM05D000675 ORTHO05D011634 1.0e-09 69.3 144 30.6
C04p30840 Brassica napus HOM05D000675 ORTHO05D031737 1.0e-09 69.3 145 32.4
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-09 68.9 126 37.3
BcaC09g49894 Brassica carinata HOM05D000675 ORTHO05D013510 1.7e-09 68.6 540 23.0
BcaC09g51113 Brassica carinata HOM05D000675 ORTHO05D013510 2.2e-09 68.2 262 29.0
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-09 67.4 555 24.3
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 3.8e-09 67.4 126 38.9
BcaB01g04056 Brassica carinata HOM05D000675 ORTHO05D011634 5.0e-09 67.0 86 38.4
BcaC05g26677 Brassica carinata HOM05D000675 ORTHO05D011634 6.5e-09 66.6 535 23.2
A01p01770 Brassica napus HOM05D000675 ORTHO05D011634 8.5e-09 66.2 87 39.1
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-08 64.3 103 41.7
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-08 64.3 211 27.5
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 3.2e-08 64.3 157 29.9
BcaC02g07514 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-08 63.9 625 25.0
C06p46010 Brassica napus HOM05D000675 ORTHO05D000395 4.2e-08 63.9 86 38.4
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 4.2e-08 63.9 274 28.1
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 7.2e-08 63.2 160 31.9
BcaC08g46630 Brassica carinata HOM05D000675 ORTHO05D003044 7.2e-08 63.2 90 36.7
BcaC09g51114 Brassica carinata HOM05D000675 ORTHO05D003044 9.4e-08 62.8 105 34.3
C01p14790 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-07 61.6 277 26.0
C04p11110 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-07 61.6 116 33.6
BolC4t22759H Brassica oleracea HOM05D000675 ORTHO05D000395 2.1e-07 61.6 116 33.6
BcaB07g33977 Brassica carinata HOM05D000675 ORTHO05D003044 2.7e-07 61.2 85 36.5
A05p25770 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-07 60.1 90 44.4
BolC5t30500H Brassica oleracea HOM05D000675 ORTHO05D000395 6.1e-07 60.1 109 34.9
BcaC09g51109 Brassica carinata HOM05D000675 ORTHO05D013510 1.8e-06 58.5 115 33.0
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 8.8e-06 56.2 187 29.4
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 8.8e-06 56.2 259 29.3


User provided reference genes

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