Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1432.9 723 100.0
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1346.6 723 93.6
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1319.3 724 92.1
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1312.4 724 91.3
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1312.4 724 91.3
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1292.3 730 89.9
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1288.5 723 89.3
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1275.0 724 89.6
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1270.8 724 89.1
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1268.1 728 88.9
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1264.2 725 87.9
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1253.8 724 89.0
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1251.1 723 86.7
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1245.7 724 88.4
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1244.6 723 86.6
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1237.6 723 87.0
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1212.2 727 86.8
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1173.3 744 81.2
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1151.0 721 83.6
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 0.0e+00 1095.1 728 75.8
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.0e-280 968.0 542 88.4
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 5.6e-274 947.6 746 65.1
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 8.1e-273 943.7 746 65.5
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 1.1e-272 943.3 746 65.4
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.2e-271 939.9 747 65.1
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 1.6e-268 929.5 743 64.3
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.7e-268 928.7 745 65.0
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 3.0e-267 925.2 747 63.3
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 3.9e-267 924.9 748 64.4
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.1e-265 919.1 744 63.2
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 3.4e-263 911.8 747 62.7
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 1.3e-262 909.8 749 63.4
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 6.5e-262 907.5 742 63.9
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.4e-261 906.4 759 61.9
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 2.1e-260 902.5 748 62.4
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 8.7e-259 897.1 747 62.2
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.3e-257 893.3 741 62.2
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 4.8e-257 891.3 747 62.0
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 4.1e-256 888.3 660 68.0
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 5.3e-256 887.9 742 61.9
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 5.3e-256 887.9 739 61.6
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.5e-255 886.3 740 60.5
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 1.7e-254 882.9 749 61.8
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 4.2e-253 878.2 747 60.8
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 1.2e-252 876.7 746 61.3
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 2.7e-252 875.5 738 61.0
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 2.3e-251 872.5 739 62.0
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 5.1e-251 871.3 746 59.7
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 2.0e-250 869.4 738 60.6
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 4.3e-250 868.2 739 61.6
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 1.1e-248 863.6 720 61.5
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 6.9e-248 860.9 750 61.3
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 1.2e-247 860.1 741 60.2
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 2.6e-247 859.0 745 59.6
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 3.4e-247 858.6 777 57.4
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 4.5e-247 858.2 739 61.2
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 1.3e-246 856.7 750 61.2
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 2.2e-246 855.9 750 59.9
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.8e-246 855.1 764 59.4
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.9e-245 852.8 728 60.7
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 9.4e-245 850.5 747 59.4
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 3.6e-244 848.6 834 57.1
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 4.7e-244 848.2 749 59.7
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 6.1e-244 847.8 741 58.6
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 1.0e-243 847.0 747 59.7
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 8.8e-243 844.0 750 59.2
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.1e-242 843.6 746 58.7
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 5.7e-242 841.3 606 69.8
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 9.7e-242 840.5 748 59.2
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 4.8e-241 838.2 744 58.3
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.1e-240 835.1 779 56.9
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 5.3e-240 834.7 752 59.2
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 9.1e-240 833.9 775 56.4
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 1.3e-238 830.1 734 58.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.0e-238 828.2 780 56.3
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 8.5e-238 827.4 771 58.1
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.2e-234 817.0 760 56.8
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 2.6e-234 815.8 677 61.9
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 5.3e-232 808.1 735 58.2
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 1.6e-231 806.6 673 62.9
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 6.5e-230 801.2 760 57.1
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 1.5e-229 800.0 801 54.7
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.9e-229 799.7 670 61.8
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 7.2e-229 797.7 745 57.2
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 7.2e-229 797.7 770 56.6
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 8.0e-228 794.3 824 53.5
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 6.8e-227 791.2 669 61.9
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 1.8e-224 783.1 662 61.5
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.9e-221 773.1 740 57.2
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 6.3e-217 758.1 696 58.6
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 1.3e-214 750.4 670 58.1
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.5e-213 746.1 741 54.5
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 4.9e-209 731.9 810 50.9
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 2.7e-207 726.1 752 53.2
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 3.5e-207 725.7 763 52.8
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 1.7e-206 723.4 658 57.9
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 3.9e-206 722.2 654 57.6
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 8.9e-203 711.1 569 65.7
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 4.4e-202 708.8 741 52.6
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 9.8e-194 681.0 746 51.9
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 8.3e-193 677.9 738 51.4
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.7e-190 670.2 744 51.7
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 7.3e-189 664.8 729 50.6
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 7.8e-183 644.8 617 56.4
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 1.3e-177 627.5 615 55.4
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 5.4e-176 622.1 747 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 9.0e-171 604.7 794 47.4
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 7.6e-170 601.7 688 49.0
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.8e-163 580.5 633 51.2
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.2e-162 577.8 735 47.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 1.7e-161 573.9 936 40.5
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 2.8e-156 556.6 609 50.9
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 3.7e-156 556.2 597 50.4
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 5.1e-150 535.8 541 54.0
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 4.6e-143 512.7 648 48.3
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 3.9e-134 483.0 533 50.7
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.7e-132 476.5 393 62.1
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.5e-112 410.6 394 53.0
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.9e-89 333.6 339 53.4
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.9e-88 331.3 619 35.1
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 1.5e-77 295.0 701 30.2
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 1.1e-75 288.9 522 36.6
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 7.8e-58 229.6 375 38.4
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.8e-55 220.3 228 50.4
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.8e-55 220.3 228 50.4
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.8e-49 201.8 589 30.1
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 1.5e-48 198.7 187 59.9
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 3.5e-42 177.6 102 90.2
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.1e-40 172.6 150 60.7
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 6.9e-38 163.3 162 50.0
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 6.0e-34 150.2 183 43.7
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 2.3e-33 148.3 77 89.6
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 3.9e-33 147.5 77 88.3
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 6.3e-31 140.2 77 84.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 7.4e-24 116.7 56 100.0
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 3.2e-19 101.3 191 42.9
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 3.9e-17 94.4 164 39.6
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 1.5e-16 92.4 66 78.8
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 1.5e-16 92.4 66 78.8
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 1.3e-15 89.4 101 44.6
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 3.7e-15 87.8 62 61.3
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 1.4e-14 85.9 50 76.0
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.1e-10 72.0 78 47.4
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 8.0e-10 70.1 93 47.3
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 3.3e-08 64.7 56 57.1
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.4e-06 58.5 65 52.3
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 7.0e-06 57.0 65 52.3


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