Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19162 Brassica carinata HOM05D005411 ORTHO05D006463 1.8e-55 219.2 120 100.0
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 7.4e-30 134.0 75 97.3
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 2.8e-21 105.5 75 84.0
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 2.8e-21 105.5 75 84.0
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 2.8e-21 105.5 75 84.0
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 3.7e-21 105.1 75 82.7
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 3.7e-21 105.1 75 82.7
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 2.3e-15 85.9 75 70.7
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 5.2e-15 84.7 75 72.0
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 1.7e-13 79.7 75 69.3
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 2.2e-13 79.3 75 66.7
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 2.2e-13 79.3 75 70.7
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 2.2e-13 79.3 75 66.7
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 2.2e-13 79.3 75 66.7
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 2.2e-13 79.3 75 66.7
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 3.7e-13 78.6 75 68.0
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 3.7e-13 78.6 75 68.0
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 4.8e-13 78.2 76 71.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 8.3e-13 77.4 75 68.0
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 1.1e-12 77.0 75 68.0
AL8G12210 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 2.0e-11 72.8 76 65.8
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 3.5e-11 72.0 75 66.7
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 7.7e-11 70.9 64 68.8
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 1.1e-09 67.0 48 79.2
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 2.8e-08 62.4 82 50.0


User provided reference genes

Program Settings