Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 1.2e-55 219.5 108 100.0
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 7.4e-53 210.3 108 94.4
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 9.0e-51 203.4 103 95.1
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 9.0e-51 203.4 103 95.1
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 1.2e-50 203.0 106 90.6
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 2.6e-50 201.8 103 94.2
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 2.2e-41 172.2 109 78.0
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 1.4e-32 142.9 111 63.1
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 1.6e-31 139.4 109 60.6
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 3.6e-31 138.3 107 61.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.5e-29 132.9 106 64.2
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.5e-29 132.9 106 64.2
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 4.3e-29 131.3 103 63.1
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 5.7e-29 131.0 105 63.8
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 8.2e-28 127.1 111 59.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.2e-20 102.4 78 59.0
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 6.9e-19 97.4 78 56.4
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 6.9e-19 97.4 78 55.1
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 5.9e-18 94.4 101 46.5
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 7.7e-18 94.0 83 48.2
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 2.9e-17 92.0 78 55.1
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 5.0e-17 91.3 116 42.2
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 6.5e-17 90.9 97 43.3
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 8.5e-17 90.5 87 47.1
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 8.5e-17 90.5 107 39.3
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 8.5e-17 90.5 98 43.9
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 1.9e-16 89.4 83 49.4
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 4.2e-16 88.2 106 45.3
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 4.2e-16 88.2 106 45.3
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 4.2e-16 88.2 106 45.3
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 5.5e-16 87.8 108 40.7
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 7.2e-16 87.4 106 42.5
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 7.2e-16 87.4 83 47.0
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 9.4e-16 87.0 85 50.6
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 9.4e-16 87.0 107 38.3
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 9.4e-16 87.0 78 53.8
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.2e-15 86.7 110 43.6
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.2e-15 86.7 83 44.6
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 1.2e-15 86.7 111 38.7
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.2e-15 86.7 111 39.6
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 1.6e-15 86.3 78 51.3
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 1.6e-15 86.3 106 41.5
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.7e-15 85.5 83 45.8
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 2.7e-15 85.5 113 40.7
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 6.1e-15 84.3 83 43.4
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 6.1e-15 84.3 101 39.6
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 6.1e-15 84.3 78 48.7
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 6.1e-15 84.3 86 45.3
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 6.1e-15 84.3 104 42.3
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 8.0e-15 84.0 108 41.7
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 1.0e-14 83.6 83 44.6
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 1.0e-14 83.6 98 37.8
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-14 83.2 83 47.0
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 1.8e-14 82.8 101 38.6
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.8e-14 82.8 102 43.1
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.8e-14 82.8 83 43.4
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.8e-14 82.8 78 47.4
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 2.3e-14 82.4 110 41.8
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 2.3e-14 82.4 83 43.4
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 3.0e-14 82.0 103 41.7
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 3.0e-14 82.0 86 47.7
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.9e-14 81.6 99 38.4
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.9e-14 81.6 104 41.3
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 3.9e-14 81.6 111 36.9
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 3.9e-14 81.6 100 39.0
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 5.2e-14 81.3 83 44.6
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 5.2e-14 81.3 101 41.6
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 6.7e-14 80.9 97 39.2
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 6.7e-14 80.9 104 41.3
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 8.8e-14 80.5 106 37.7
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 1.1e-13 80.1 103 39.8
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.5e-13 79.7 103 43.7
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 1.5e-13 79.7 111 37.8
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.6e-13 79.0 73 49.3
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.6e-13 79.0 79 44.3
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 2.6e-13 79.0 79 48.1
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 2.6e-13 79.0 113 39.8
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.3e-13 78.6 78 44.9
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 3.3e-13 78.6 75 45.3
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 3.3e-13 78.6 78 47.4
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 4.4e-13 78.2 104 36.5
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 4.4e-13 78.2 104 35.6
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.7e-13 77.8 104 35.6
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.7e-13 77.8 79 50.6
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 7.4e-13 77.4 78 46.2
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 9.7e-13 77.0 110 36.4
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 9.7e-13 77.0 82 43.9
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-12 76.6 81 45.7
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.7e-12 76.3 83 44.6
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 1.7e-12 76.3 85 43.5
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.7e-12 76.3 78 44.9
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 1.7e-12 76.3 108 35.2
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 2.2e-12 75.9 79 44.3
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.2e-12 75.9 78 46.2
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.2e-12 75.9 78 46.2
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.8e-12 75.5 97 40.2
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.8e-12 75.5 88 43.2
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 2.8e-12 75.5 106 40.6
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.8e-12 75.5 85 43.5
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 3.7e-12 75.1 109 36.7
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 4.8e-12 74.7 102 36.3
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.8e-12 74.7 78 42.3
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 4.8e-12 74.7 109 36.7
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 4.8e-12 74.7 105 37.1
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 6.3e-12 74.3 73 43.8
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 6.3e-12 74.3 105 37.1
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.3e-12 74.3 81 45.7
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 8.2e-12 73.9 91 38.5
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 8.2e-12 73.9 78 43.6
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 8.2e-12 73.9 78 39.7
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.2e-12 73.9 98 35.7
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.4e-11 73.2 85 42.4
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-11 73.2 83 39.8
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 2.4e-11 72.4 77 41.6
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.4e-11 72.4 99 35.4
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 2.4e-11 72.4 102 37.3
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.4e-11 72.4 81 43.2
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 3.1e-11 72.0 99 38.4
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 5.3e-11 71.2 77 41.6
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 5.3e-11 71.2 91 39.6
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 5.3e-11 71.2 99 40.4
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 7.0e-11 70.9 78 44.9
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 9.1e-11 70.5 114 36.0
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 1.2e-10 70.1 100 42.0
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.2e-10 70.1 117 29.9
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 1.6e-10 69.7 96 34.4
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 1.6e-10 69.7 85 41.2
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.6e-10 69.7 114 36.0
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 2.6e-10 68.9 84 39.3
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.5e-10 68.6 79 40.5
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 4.5e-10 68.2 83 39.8
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.5e-10 68.2 97 35.1
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 5.9e-10 67.8 99 39.4
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 7.7e-10 67.4 105 31.4
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 7.7e-10 67.4 108 31.5
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 1.0e-09 67.0 102 33.3
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.7e-09 66.2 102 36.3
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.2e-09 65.9 101 37.6
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 2.9e-09 65.5 57 47.4
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 2.9e-09 65.5 83 41.0
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 1.1e-08 63.5 85 36.5
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.5e-08 63.2 99 33.3
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 5.5e-08 61.2 78 37.2
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.4e-08 60.5 72 40.3
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 2.7e-07 58.9 98 30.6
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 2.7e-07 58.9 117 32.5
SGA_v2.0_scaffold24G10703 Striga asiatica HOM05D002739 ORTHO05D002877 8.0e-07 57.4 87 35.6
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 1.4e-06 56.6 81 34.6
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 1.4e-06 56.6 81 35.8
BcaC09g51875 Brassica carinata HOM05D002739 ORTHO05D002877 1.8e-06 56.2 113 32.7
Potri.001G023300 Populus trichocarpa HOM05D002739 ORTHO05D002877 1.8e-06 56.2 82 36.6
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 1.8e-06 56.2 90 36.7
CiPaw.13G010100 Carya illinoinensis HOM05D002739 ORTHO05D002877 2.3e-06 55.8 100 31.0
FAN10G1712 Fragaria x ananassa HOM05D002739 ORTHO05D002877 2.3e-06 55.8 91 34.1
AL7G21220 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 3.0e-06 55.5 109 33.0
FvH4_7g02210 Fragaria vesca HOM05D002739 ORTHO05D002877 3.0e-06 55.5 91 34.1
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 3.0e-06 55.5 81 38.3
Sabra01G0017600 Salix brachista HOM05D002739 ORTHO05D002877 4.0e-06 55.1 82 37.8
Cc02_g29460 Coffea canephora HOM05D002739 ORTHO05D002877 6.7e-06 54.3 102 32.4
CSS0000269 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.8e-06 53.9 58 39.7
CSS0014844 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.8e-06 53.9 58 39.7
CSS0046368 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.8e-06 53.9 58 39.7
CSS0048223 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.8e-06 53.9 58 39.7


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