Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18948 Brassica carinata HOM05D020973 ORTHO05D027199 1.4e-56 222.6 109 100.0
A03p40230 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-30 135.6 98 70.4
BraA03t13176Z Brassica rapa HOM05D000209 ORTHO05D000129 5.2e-30 134.4 85 75.3
C03p48930 Brassica napus HOM05D000209 ORTHO05D000129 8.8e-30 133.7 94 70.2
Sp3g15690 Schrenkiella parvula HOM05D000209 ORTHO05D000129 3.8e-25 118.2 110 57.3
Thhalv10020988m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.3e-22 109.0 87 63.2
C03p90210 Brassica napus HOM05D020973 ORTHO05D027199 4.4e-21 104.8 63 82.5
Carub.0003s1727 Capsella rubella HOM05D000209 ORTHO05D000129 3.1e-19 98.6 78 64.1
BcaB04g20837 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-18 96.7 93 54.8
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-18 94.4 78 59.0
BcaC09g48713 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-17 92.8 79 62.0
A01p36780 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-17 92.8 79 62.0
BraA01t03739Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-17 92.8 79 62.0
AL3G30630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-16 90.1 76 63.2
Thhalv10002957m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-16 89.7 104 48.1
AT3G17570 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.6e-16 87.8 78 60.3
A08p02620 Brassica napus HOM05D020973 ORTHO05D027199 7.3e-16 87.4 66 68.2
BcaB04g20836 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-15 85.9 102 50.0
Thhalv10002791m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.1e-15 85.9 104 47.1
AL3G30600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.8e-15 85.5 81 53.1
AT3G17540 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-14 82.0 79 50.6
AL3G30330 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.8e-14 80.9 82 48.8
AL4G15010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-13 78.6 79 53.2
CARHR092860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.8e-13 77.8 79 51.9
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.2e-11 72.0 79 46.8
BolC6t35985H Brassica oleracea HOM05D000209 ORTHO05D000129 5.4e-11 71.2 77 46.8
AT3G17265 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-11 70.9 81 49.4
A05p18310 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-10 69.7 82 43.9
BraA05t20724Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-10 69.7 82 43.9
AT3G17280 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-10 68.2 82 42.7
A01p10830 Brassica napus HOM05D000209 ORTHO05D000129 6.0e-10 67.8 76 48.7
BraA01t01030Z Brassica rapa HOM05D000209 ORTHO05D000129 6.0e-10 67.8 76 48.7
BcaB02g10950 Brassica carinata HOM05D000209 ORTHO05D000129 7.8e-10 67.4 79 41.8
BcaC08g44081 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-09 67.0 82 40.2
Carub.0004s0385 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-09 67.0 110 40.9
Carub.0004s0386 Capsella rubella HOM05D000209 ORTHO05D000129 1.7e-09 66.2 107 45.8
A01p41660 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-09 65.9 69 43.5
BraA01t04240Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-09 65.9 69 43.5
BraA08t32214Z Brassica rapa HOM05D000209 ORTHO05D000129 5.0e-09 64.7 85 41.2
BcaNung01175 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-09 64.3 115 39.1
AT2G24510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-09 63.9 66 53.0
A08p01610 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-08 63.5 85 40.0
BcaC08g43521 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-08 63.2 87 39.1
BcaC08g44085 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-08 63.2 81 40.7
C06p14180 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-08 62.8 80 45.0
BolC6t36595H Brassica oleracea HOM05D001962 ORTHO05D002236 1.9e-08 62.8 80 45.0
C06p09120 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-08 62.4 87 39.1
CARHR092590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.3e-08 62.0 78 41.0
BcaC01g01386 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-08 61.6 85 38.8
C03p91460 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-08 61.6 85 38.8
BolC3t21464H Brassica oleracea HOM05D000209 ORTHO05D000129 4.3e-08 61.6 85 38.8
AL8G23220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.6e-08 61.2 73 41.1
BcaC09g48690 Brassica carinata HOM05D000209 ORTHO05D000129 5.6e-08 61.2 81 43.2
C01p46900 Brassica napus HOM05D000209 ORTHO05D000129 5.6e-08 61.2 81 43.2
BolC1t04662H Brassica oleracea HOM05D000209 ORTHO05D000129 5.6e-08 61.2 81 43.2
A01p10820 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-08 60.8 76 43.4
C03p91480 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-08 60.8 79 43.0
C06p14860 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-08 60.8 71 43.7
BolC3t21466H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-08 60.8 79 43.0
BolC6t36664H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-08 60.8 71 43.7
BraA01t01029Z Brassica rapa HOM05D000209 ORTHO05D000129 7.3e-08 60.8 76 43.4
Carub.0002s0522 Capsella rubella HOM05D000209 ORTHO05D000129 7.3e-08 60.8 68 48.5
A01p37020 Brassica napus HOM05D000209 ORTHO05D000129 9.5e-08 60.5 81 43.2
BraA01t03639Z Brassica rapa HOM05D000209 ORTHO05D000129 9.5e-08 60.5 81 43.2
BraA01t03763Z Brassica rapa HOM05D000209 ORTHO05D000129 9.5e-08 60.5 81 43.2
C07p29410 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-07 59.3 73 46.6
C01p12800 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-07 58.9 77 42.9
BolC1t01257H Brassica oleracea HOM05D000209 ORTHO05D000129 2.8e-07 58.9 77 42.9
BcaB04g17085 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-07 58.2 84 38.1
Thhalv10027561m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.7e-07 58.2 72 43.1
AL8G24290 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 56.6 73 38.4
Thhalv10022006m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.8e-06 56.2 70 41.4
AL3G30310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-06 55.5 47 61.7
BolC3t17165H Brassica oleracea HOM05D000209 ORTHO05D000129 3.1e-06 55.5 45 66.7
BcaC09g48853 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-06 55.1 83 39.8
C01p45210 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-06 55.1 83 39.8
BolC1t04495H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-06 55.1 83 39.8
Carub.0003s1724 Capsella rubella HOM05D000209 ORTHO05D000129 4.0e-06 55.1 89 43.8
Thhalv10022266m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.0e-06 55.1 113 36.3
AL3G31590 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 54.7 69 37.7
BcaC09g51479 Brassica carinata HOM05D000209 ORTHO05D000129 5.2e-06 54.7 76 39.5
A01p35620 Brassica napus HOM05D000209 ORTHO05D000129 5.2e-06 54.7 83 38.6
BraA01t03643Z Brassica rapa HOM05D000209 ORTHO05D000129 5.2e-06 54.7 83 38.6
Carub.0002s0273 Capsella rubella HOM05D000209 ORTHO05D000129 5.2e-06 54.7 100 34.0
BcaC06g35672 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-06 54.3 105 35.2
C07p12230 Brassica napus HOM05D000209 ORTHO05D000129 6.8e-06 54.3 105 35.2
Carub.0006s3223 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-06 54.3 90 34.4
Carub.0008s1030 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-06 54.3 73 37.0
CARHR120380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.8e-06 54.3 99 32.3
BcaC05g28520 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-06 53.9 70 41.4
A05p18360 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-06 53.9 81 42.0
A07p08080 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-06 53.9 73 42.5
BolC5t33327H Brassica oleracea HOM05D000209 ORTHO05D000129 8.9e-06 53.9 70 41.4
BraA07t28593Z Brassica rapa HOM05D000209 ORTHO05D000129 8.9e-06 53.9 73 42.5
Carub.0008s1027 Capsella rubella HOM05D000209 ORTHO05D000129 8.9e-06 53.9 73 35.6
Sp3g17310 Schrenkiella parvula HOM05D000209 ORTHO05D000129 8.9e-06 53.9 72 44.4


User provided reference genes

Program Settings