Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 1.8e-75 285.8 142 100.0
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 3.2e-40 168.7 108 81.5
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 3.2e-40 168.7 108 81.5
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 1.2e-29 133.7 87 81.6
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 7.5e-29 131.0 87 80.5
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 9.8e-21 104.0 86 65.1
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 9.8e-21 104.0 86 65.1
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 1.3e-20 103.6 86 65.1
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 6.3e-20 101.3 84 63.1
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 7.0e-19 97.8 84 64.3
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 1.0e-17 94.0 82 62.2
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 1.6e-15 86.7 85 57.6
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 1.6e-15 86.7 85 57.6
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 1.6e-15 86.7 85 57.6
A03p39670 Brassica napus HOM05D008709 ORTHO05D011440 3.6e-15 85.5 85 54.1
BcaB04g18885 Brassica carinata HOM05D008709 ORTHO05D011440 1.0e-14 84.0 82 58.5
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 2.2e-12 76.3 85 54.1
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 6.3e-12 74.7 85 49.4
BcaC01g03841 Brassica carinata HOM05D008709 ORTHO05D011440 1.8e-11 73.2 82 51.2
BcaC01g03839 Brassica carinata HOM05D008709 ORTHO05D011440 2.4e-11 72.8 85 54.1
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 2.0e-10 69.7 89 46.1
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 3.5e-10 68.9 89 46.1
BraA01t03864Z Brassica rapa HOM05D008709 ORTHO05D024458 1.0e-09 67.4 89 46.1
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 1.7e-09 66.6 89 46.1
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 1.7e-09 66.6 89 46.1
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 2.9e-09 65.9 87 46.0
CARHR091150 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.5e-08 63.5 82 43.9
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 2.5e-08 62.8 89 40.4
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 5.6e-08 61.6 85 44.7
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 4.7e-07 58.5 70 50.0
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 6.1e-07 58.2 43 72.1
Thhalv10009560m.g Eutrema salsugineum HOM05D008709 ORTHO05D011440 8.0e-07 57.8 82 45.1
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 1.8e-06 56.6 70 50.0
BolC3t17085H Brassica oleracea HOM05D008709 ORTHO05D011440 8.9e-06 54.3 70 48.6


User provided reference genes

Program Settings