Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 1.1e-60 236.5 119 100.0
BcaC01g03839 Brassica carinata HOM05D008709 ORTHO05D011440 8.7e-47 190.3 124 83.1
BraA03t13117Z Brassica rapa HOM05D008709 ORTHO05D011440 3.9e-31 138.3 87 83.9
A03p39690 Brassica napus HOM05D008709 ORTHO05D011440 6.7e-31 137.5 87 82.8
BolC3t17088H Brassica oleracea HOM05D008709 ORTHO05D011440 2.1e-29 132.5 85 83.5
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 1.8e-28 129.4 121 61.2
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 1.8e-28 129.4 121 61.2
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 2.4e-28 129.0 121 61.2
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 1.9e-25 119.4 122 56.6
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 1.9e-25 119.4 122 56.6
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 1.9e-25 119.4 122 56.6
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 2.7e-24 115.5 122 55.7
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 6.1e-24 114.4 119 55.5
C03p48070 Brassica napus HOM05D008709 ORTHO05D011440 1.1e-22 110.2 62 88.7
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 2.8e-21 105.5 119 48.7
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 2.8e-21 105.5 119 48.7
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 2.8e-21 105.5 119 48.7
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 3.1e-20 102.1 121 48.8
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 1.5e-19 99.8 125 46.4
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 3.4e-19 98.6 123 50.4
BcaC01g03841 Brassica carinata HOM05D008709 ORTHO05D011440 4.5e-19 98.2 122 50.0
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.0e-18 97.1 107 53.3
BcaC01g03840 Brassica carinata HOM05D008709 ORTHO05D021804 8.5e-18 94.0 124 48.4
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 1.4e-17 93.2 129 44.2
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 2.1e-16 89.4 124 47.6
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 1.4e-15 86.7 125 44.0
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 8.8e-15 84.0 134 42.5
A03p39670 Brassica napus HOM05D008709 ORTHO05D011440 1.5e-14 83.2 92 48.9
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 2.0e-14 82.8 127 42.5
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 2.5e-14 82.4 132 43.9
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 2.2e-13 79.3 132 43.2
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 6.3e-13 77.8 85 54.1
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 6.3e-13 77.8 132 42.4
BraA01t03864Z Brassica rapa HOM05D008709 ORTHO05D024458 8.2e-13 77.4 135 39.3
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.4e-12 76.6 130 43.1
BcaB04g18885 Brassica carinata HOM05D008709 ORTHO05D011440 3.1e-12 75.5 83 47.0
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 1.2e-11 73.6 131 39.7
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 1.2e-11 73.6 131 39.7
BolC3t17085H Brassica oleracea HOM05D008709 ORTHO05D011440 2.0e-11 72.8 118 42.4
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 7.7e-11 70.9 116 43.1
Thhalv10009560m.g Eutrema salsugineum HOM05D008709 ORTHO05D011440 1.3e-10 70.1 81 45.7
BcaC06g31532 Brassica carinata HOM05D023624 ORTHO05D032369 2.2e-10 69.3 125 42.4
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 1.4e-09 66.6 69 56.5
A03p39680 Brassica napus HOM05D008709 ORTHO05D021804 1.2e-08 63.5 90 44.4
CARHR091150 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.2e-08 63.5 92 35.9
BraA03t13116Z Brassica rapa HOM05D008709 ORTHO05D021804 1.6e-08 63.2 90 43.3
C03p48060 Brassica napus HOM05D008709 ORTHO05D021804 2.7e-08 62.4 110 40.0
BolC3t17087H Brassica oleracea HOM05D008709 ORTHO05D021804 2.7e-08 62.4 110 40.0
CARHR102450 Cardamine hirsuta HOM05D008709 ORTHO05D011440 2.3e-07 59.3 71 46.5
BcaB03g12595 Brassica carinata HOM05D014281 ORTHO05D027372 5.1e-07 58.2 93 38.7
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 6.7e-07 57.8 111 40.5
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 2.0e-06 56.2 111 40.5
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 3.3e-06 55.5 110 39.1
A09p17660 Brassica napus HOM05D013697 ORTHO05D015934 4.4e-06 55.1 124 33.9
CsaV3_1G044000 Cucumis sativus L. HOM05D002139 ORTHO05D002264 4.4e-06 55.1 103 31.1
C09p22010 Brassica napus HOM05D013697 ORTHO05D015934 5.7e-06 54.7 124 35.5
BolC9t55105H Brassica oleracea HOM05D013697 ORTHO05D015934 5.7e-06 54.7 124 35.5
MELO3C009994.2 Cucumis melo HOM05D002139 ORTHO05D002264 5.7e-06 54.7 103 30.1
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 7.4e-06 54.3 111 40.5
C09p22000 Brassica napus HOM05D013697 ORTHO05D015934 7.4e-06 54.3 124 33.9
BolC9t55104H Brassica oleracea HOM05D013697 ORTHO05D015934 7.4e-06 54.3 124 33.9


User provided reference genes

Program Settings