Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 4.0e-84 314.7 156 100.0
BcaC01g03840 Brassica carinata HOM05D008709 ORTHO05D021804 3.7e-29 132.1 149 50.3
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 2.6e-27 125.9 155 48.4
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 1.0e-26 124.0 157 47.8
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 3.6e-24 115.5 149 47.7
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 2.3e-23 112.8 152 43.4
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 4.4e-22 108.6 152 44.1
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 3.7e-21 105.5 128 45.3
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 3.7e-21 105.5 128 45.3
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 4.8e-21 105.1 151 41.1
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 8.2e-21 104.4 151 40.4
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 8.2e-21 104.4 151 40.4
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 1.8e-20 103.2 127 48.8
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 1.2e-19 100.5 155 40.6
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 1.2e-19 100.5 155 40.6
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 7.7e-19 97.8 133 42.9
C03p48060 Brassica napus HOM05D008709 ORTHO05D021804 3.8e-18 95.5 109 46.8
BolC3t17087H Brassica oleracea HOM05D008709 ORTHO05D021804 3.8e-18 95.5 109 46.8
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 8.5e-18 94.4 129 44.2
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 1.4e-17 93.6 155 38.1
BraA03t13116Z Brassica rapa HOM05D008709 ORTHO05D021804 3.2e-17 92.4 109 45.9
A03p39680 Brassica napus HOM05D008709 ORTHO05D021804 4.2e-17 92.0 109 45.9
BcaC01g03839 Brassica carinata HOM05D008709 ORTHO05D011440 9.4e-17 90.9 133 45.9
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 3.0e-15 85.9 152 39.5
BcaC01g03841 Brassica carinata HOM05D008709 ORTHO05D011440 6.7e-15 84.7 138 39.9
BolC3t17085H Brassica oleracea HOM05D008709 ORTHO05D011440 1.1e-12 77.4 127 42.5
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 1.8e-12 76.6 78 56.4
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 3.1e-12 75.9 142 34.5
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 1.2e-11 73.9 158 32.9
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 2.6e-11 72.8 119 38.7
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 5.9e-11 71.6 162 34.0
A03p39690 Brassica napus HOM05D008709 ORTHO05D011440 1.0e-10 70.9 78 53.8
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 1.3e-10 70.5 158 32.3
BraA03t13117Z Brassica rapa HOM05D008709 ORTHO05D011440 1.3e-10 70.5 78 53.8
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.7e-10 70.1 139 35.3
A03p39670 Brassica napus HOM05D008709 ORTHO05D011440 1.9e-09 66.6 115 36.5
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.9e-09 66.6 159 37.7
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 2.5e-09 66.2 89 40.4
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 9.4e-09 64.3 150 32.7
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 2.7e-08 62.8 121 36.4
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 2.7e-08 62.8 121 36.4
BcaC06g31532 Brassica carinata HOM05D023624 ORTHO05D032369 4.7e-08 62.0 125 40.0
Thhalv10009560m.g Eutrema salsugineum HOM05D008709 ORTHO05D011440 4.7e-08 62.0 120 32.5
BcaB04g18885 Brassica carinata HOM05D008709 ORTHO05D011440 8.0e-08 61.2 91 38.5
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.0e-07 60.8 120 39.2
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 1.8e-07 60.1 120 38.3
BolC3t17088H Brassica oleracea HOM05D008709 ORTHO05D011440 2.3e-07 59.7 78 50.0
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 4.0e-07 58.9 119 36.1
BraA06t25309Z Brassica rapa HOM05D002139 ORTHO05D002264 6.7e-07 58.2 141 33.3
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 6.7e-07 58.2 120 35.8
A08p19780 Brassica napus HOM05D014281 ORTHO05D040471 8.8e-07 57.8 75 46.7
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 1.5e-06 57.0 120 38.3
C03p48070 Brassica napus HOM05D008709 ORTHO05D011440 2.6e-06 56.2 65 50.8


User provided reference genes

Program Settings